RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
TRIT1-213ENST00000495175 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
TRIT1-213ENST00000495175 ABCC9O60706 1549 aa23.02■■□□□ 1.28
TRIT1-213ENST00000495175 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
TRIT1-213ENST00000495175 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
TRIT1-213ENST00000495175 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
TRIT1-213ENST00000495175 NACADO15069 1562 aa22.33■■□□□ 1.17
TRIT1-213ENST00000495175 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
TRIT1-213ENST00000495175 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
TRIT1-213ENST00000495175 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
TRIT1-213ENST00000495175 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
TRIT1-213ENST00000495175 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
TRIT1-213ENST00000495175 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
TRIT1-213ENST00000495175 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
TRIT1-213ENST00000495175 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
TRIT1-213ENST00000495175 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
TRIT1-213ENST00000495175 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
TRIT1-213ENST00000495175 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
TRIT1-213ENST00000495175 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
TRIT1-213ENST00000495175 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
TRIT1-213ENST00000495175 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
TRIT1-213ENST00000495175 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
TRIT1-213ENST00000495175 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
TRIT1-213ENST00000495175 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
TRIT1-213ENST00000495175 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
TRIT1-213ENST00000495175 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
TRIT1-213ENST00000495175 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
TRIT1-213ENST00000495175 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
TRIT1-213ENST00000495175 WIZO95785 1651 aa20.57■□□□□ 0.88
TRIT1-213ENST00000495175 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
TRIT1-213ENST00000495175 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
TRIT1-213ENST00000495175 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
TRIT1-213ENST00000495175 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
TRIT1-213ENST00000495175 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
TRIT1-213ENST00000495175 NESP48681 1621 aa20.04■□□□□ 0.8
TRIT1-213ENST00000495175 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
TRIT1-213ENST00000495175 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
TRIT1-213ENST00000495175 CFTRP13569 1480 aa19.98■□□□□ 0.79
TRIT1-213ENST00000495175 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
TRIT1-213ENST00000495175 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
TRIT1-213ENST00000495175 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
TRIT1-213ENST00000495175 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
TRIT1-213ENST00000495175 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
TRIT1-213ENST00000495175 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
TRIT1-213ENST00000495175 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
TRIT1-213ENST00000495175 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
TRIT1-213ENST00000495175 WDR62O43379 1518 aa19.62■□□□□ 0.73
TRIT1-213ENST00000495175 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
TRIT1-213ENST00000495175 CUX2O14529 1486 aa19.53■□□□□ 0.72
TRIT1-213ENST00000495175 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
TRIT1-213ENST00000495175 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
TRIT1-213ENST00000495175 CUX1P39880 1505 aa19.49■□□□□ 0.71
TRIT1-213ENST00000495175 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
TRIT1-213ENST00000495175 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
TRIT1-213ENST00000495175 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
TRIT1-213ENST00000495175 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.691e-6■■■■■ 58.5
TRIT1-213ENST00000495175 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
TRIT1-213ENST00000495175 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
TRIT1-213ENST00000495175 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
TRIT1-213ENST00000495175 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
TRIT1-213ENST00000495175 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
TRIT1-213ENST00000495175 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
TRIT1-213ENST00000495175 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
TRIT1-213ENST00000495175 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
TRIT1-213ENST00000495175 SOGA1O94964 1423 aa19.22■□□□□ 0.67
TRIT1-213ENST00000495175 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
TRIT1-213ENST00000495175 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TRIT1-213ENST00000495175 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
TRIT1-213ENST00000495175 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.655e-7■■■■□ 26.4
TRIT1-213ENST00000495175 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.65
TRIT1-213ENST00000495175 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
TRIT1-213ENST00000495175 PBRM1Q86U86 1689 aa19.02■□□□□ 0.64
TRIT1-213ENST00000495175 TRIM41Q8WV44 630 aa19■□□□□ 0.63
TRIT1-213ENST00000495175 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
TRIT1-213ENST00000495175 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
TRIT1-213ENST00000495175 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
TRIT1-213ENST00000495175 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
TRIT1-213ENST00000495175 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
TRIT1-213ENST00000495175 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
TRIT1-213ENST00000495175 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
TRIT1-213ENST00000495175 IGF1RP08069 1367 aa18.88■□□□□ 0.61
TRIT1-213ENST00000495175 CHD1O14646 1710 aa18.86■□□□□ 0.61
TRIT1-213ENST00000495175 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
TRIT1-213ENST00000495175 CUL7Q14999 1698 aa18.82■□□□□ 0.6
TRIT1-213ENST00000495175 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
TRIT1-213ENST00000495175 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
TRIT1-213ENST00000495175 EEA1Q15075 1411 aa18.75■□□□□ 0.59
TRIT1-213ENST00000495175 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
TRIT1-213ENST00000495175 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
TRIT1-213ENST00000495175 NUP160Q12769 1436 aa18.72■□□□□ 0.59
TRIT1-213ENST00000495175 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.59
TRIT1-213ENST00000495175 CEP170Q5SW79 1584 aa18.71■□□□□ 0.59
TRIT1-213ENST00000495175 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
TRIT1-213ENST00000495175 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
TRIT1-213ENST00000495175 FBLN2P98095 1184 aa18.66■□□□□ 0.58
TRIT1-213ENST00000495175 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
TRIT1-213ENST00000495175 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
TRIT1-213ENST00000495175 KIF21BO75037 1637 aa18.61■□□□□ 0.57
TRIT1-213ENST00000495175 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
TRIT1-213ENST00000495175 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms