RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 AEBP2Q6ZN18 517 aaPredicted RBP28.89■■■□□ 2.22
RTN4-214ENST00000486085 CHIC1Q5VXU3 224 aa28.52■■■□□ 2.16
RTN4-214ENST00000486085 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
RTN4-214ENST00000486085 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
RTN4-214ENST00000486085 PLPPR3Q6T4P5 718 aa23.31■■□□□ 1.32
RTN4-214ENST00000486085 FOXD1Q16676 465 aa22.65■■□□□ 1.22
RTN4-214ENST00000486085 ADRA2BP18089 450 aa22.11■■□□□ 1.13
RTN4-214ENST00000486085 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
RTN4-214ENST00000486085 PIAS4Q8N2W9 510 aaPredicted RBP21.46■■□□□ 1.03
RTN4-214ENST00000486085 MSH5O43196 834 aa20.72■□□□□ 0.91
RTN4-214ENST00000486085 PPP4R3CPQ6ZMV5 832 aa20.61■□□□□ 0.89
RTN4-214ENST00000486085 KCNA4P22459 653 aa20.53■□□□□ 0.88
RTN4-214ENST00000486085 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
RTN4-214ENST00000486085 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
RTN4-214ENST00000486085 MAPK8IP2Q13387 824 aaPredicted RBP19.98■□□□□ 0.79
RTN4-214ENST00000486085 CNKSR2Q8WXI2 1034 aa19.94■□□□□ 0.78
RTN4-214ENST00000486085 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
RTN4-214ENST00000486085 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
RTN4-214ENST00000486085 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
RTN4-214ENST00000486085 EHMT2Q96KQ7 1210 aa19.5■□□□□ 0.71
RTN4-214ENST00000486085 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
RTN4-214ENST00000486085 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
RTN4-214ENST00000486085 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
RTN4-214ENST00000486085 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
RTN4-214ENST00000486085 ZBTB22O15209 634 aa18.89■□□□□ 0.61
RTN4-214ENST00000486085 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
RTN4-214ENST00000486085 FOXD4L1Q9NU39 408 aa18.78■□□□□ 0.6
RTN4-214ENST00000486085 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
RTN4-214ENST00000486085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
RTN4-214ENST00000486085 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
RTN4-214ENST00000486085 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
RTN4-214ENST00000486085 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
RTN4-214ENST00000486085 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
RTN4-214ENST00000486085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
RTN4-214ENST00000486085 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
RTN4-214ENST00000486085 SAMD1Q6SPF0 538 aaPredicted RBP17.96■□□□□ 0.47
RTN4-214ENST00000486085 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
RTN4-214ENST00000486085 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
RTN4-214ENST00000486085 APLP2Q06481 763 aa17.73■□□□□ 0.43
RTN4-214ENST00000486085 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
RTN4-214ENST00000486085 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
RTN4-214ENST00000486085 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
RTN4-214ENST00000486085 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
RTN4-214ENST00000486085 CAPN15O75808 1086 aa17.49■□□□□ 0.39
RTN4-214ENST00000486085 POLA2Q14181 598 aa17.27■□□□□ 0.36
RTN4-214ENST00000486085 FKBP8Q14318 412 aa17.25■□□□□ 0.35
RTN4-214ENST00000486085 ABCB7O75027 752 aa17.19■□□□□ 0.34
RTN4-214ENST00000486085 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
RTN4-214ENST00000486085 DSG3P32926 999 aa17.08■□□□□ 0.32
RTN4-214ENST00000486085 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
RTN4-214ENST00000486085 FBLN2P98095 1184 aa17.07■□□□□ 0.32
RTN4-214ENST00000486085 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
RTN4-214ENST00000486085 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
RTN4-214ENST00000486085 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
RTN4-214ENST00000486085 PROM2Q8N271 834 aa16.57■□□□□ 0.24
RTN4-214ENST00000486085 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
RTN4-214ENST00000486085 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
RTN4-214ENST00000486085 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
RTN4-214ENST00000486085 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
RTN4-214ENST00000486085 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
RTN4-214ENST00000486085 SSUH2Q9Y2M2 353 aa16.43■□□□□ 0.22
RTN4-214ENST00000486085 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
RTN4-214ENST00000486085 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
RTN4-214ENST00000486085 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.2
RTN4-214ENST00000486085 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
RTN4-214ENST00000486085 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
RTN4-214ENST00000486085 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
RTN4-214ENST00000486085 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
RTN4-214ENST00000486085 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
RTN4-214ENST00000486085 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
RTN4-214ENST00000486085 MIER1Q8N108 512 aa16■□□□□ 0.15
RTN4-214ENST00000486085 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
RTN4-214ENST00000486085 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
RTN4-214ENST00000486085 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
RTN4-214ENST00000486085 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
RTN4-214ENST00000486085 PLEKHG5O94827 1062 aa15.85■□□□□ 0.13
RTN4-214ENST00000486085 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
RTN4-214ENST00000486085 PRR29P0C7W0 189 aa15.83■□□□□ 0.12
RTN4-214ENST00000486085 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
RTN4-214ENST00000486085 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
RTN4-214ENST00000486085 CREBZFQ9NS37 354 aa15.69■□□□□ 0.1
RTN4-214ENST00000486085 PKD2Q13563 968 aa15.67■□□□□ 0.1
RTN4-214ENST00000486085 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
RTN4-214ENST00000486085 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
RTN4-214ENST00000486085 ECM2O94769 699 aaPredicted RBP15.53■□□□□ 0.08
RTN4-214ENST00000486085 CHADLQ6NUI6 762 aa15.53■□□□□ 0.08
RTN4-214ENST00000486085 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
RTN4-214ENST00000486085 NUBP1P53384 320 aa15.51■□□□□ 0.07
RTN4-214ENST00000486085 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
RTN4-214ENST00000486085 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
RTN4-214ENST00000486085 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
RTN4-214ENST00000486085 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
RTN4-214ENST00000486085 GSE1Q14687 1217 aa15.43■□□□□ 0.06
RTN4-214ENST00000486085 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.067e-14■□□□□ 9.2
RTN4-214ENST00000486085 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
RTN4-214ENST00000486085 FAM212AQ96EL1 285 aa15.38■□□□□ 0.05
RTN4-214ENST00000486085 RGL2O15211 777 aa15.37■□□□□ 0.05
RTN4-214ENST00000486085 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
RTN4-214ENST00000486085 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
RTN4-214ENST00000486085 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms