RNA–Protein interactions for RNA: ENST00000469476.2

TRIT1-208, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-208ENST00000469476 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
TRIT1-208ENST00000469476 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
TRIT1-208ENST00000469476 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
TRIT1-208ENST00000469476 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
TRIT1-208ENST00000469476 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
TRIT1-208ENST00000469476 FOXD1Q16676 465 aa14.71□□□□□ -0.05
TRIT1-208ENST00000469476 ADRA2BP18089 450 aa14.64□□□□□ -0.07
TRIT1-208ENST00000469476 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
TRIT1-208ENST00000469476 KCNA4P22459 653 aa14.04□□□□□ -0.16
TRIT1-208ENST00000469476 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
TRIT1-208ENST00000469476 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
TRIT1-208ENST00000469476 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
TRIT1-208ENST00000469476 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
TRIT1-208ENST00000469476 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
TRIT1-208ENST00000469476 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
TRIT1-208ENST00000469476 MSH5O43196 834 aa13.31□□□□□ -0.28
TRIT1-208ENST00000469476 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
TRIT1-208ENST00000469476 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
TRIT1-208ENST00000469476 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
TRIT1-208ENST00000469476 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
TRIT1-208ENST00000469476 ZBTB22O15209 634 aa13□□□□□ -0.33
TRIT1-208ENST00000469476 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
TRIT1-208ENST00000469476 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
TRIT1-208ENST00000469476 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
TRIT1-208ENST00000469476 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
TRIT1-208ENST00000469476 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
TRIT1-208ENST00000469476 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
TRIT1-208ENST00000469476 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
TRIT1-208ENST00000469476 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
TRIT1-208ENST00000469476 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
TRIT1-208ENST00000469476 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
TRIT1-208ENST00000469476 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
TRIT1-208ENST00000469476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.498e-7■■■■□ 21.6
TRIT1-208ENST00000469476 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
TRIT1-208ENST00000469476 FKBP8Q14318 412 aa11.91□□□□□ -0.5
TRIT1-208ENST00000469476 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
TRIT1-208ENST00000469476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.78□□□□□ -0.52
TRIT1-208ENST00000469476 HNRNPUL2Q1KMD3 747 aaKnown RBP11.78□□□□□ -0.52
TRIT1-208ENST00000469476 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
TRIT1-208ENST00000469476 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
TRIT1-208ENST00000469476 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
TRIT1-208ENST00000469476 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-208ENST00000469476 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
TRIT1-208ENST00000469476 APLP2Q06481 763 aa11.5□□□□□ -0.57
TRIT1-208ENST00000469476 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
TRIT1-208ENST00000469476 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
TRIT1-208ENST00000469476 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
TRIT1-208ENST00000469476 POLA2Q14181 598 aa11.38□□□□□ -0.59
TRIT1-208ENST00000469476 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
TRIT1-208ENST00000469476 CAPN15O75808 1086 aa11.34□□□□□ -0.59
TRIT1-208ENST00000469476 PROM2Q8N271 834 aa11.34□□□□□ -0.59
TRIT1-208ENST00000469476 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
TRIT1-208ENST00000469476 FBLN2P98095 1184 aa11.27□□□□□ -0.61
TRIT1-208ENST00000469476 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
TRIT1-208ENST00000469476 ABCB7O75027 752 aa11.24□□□□□ -0.61
TRIT1-208ENST00000469476 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
TRIT1-208ENST00000469476 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
TRIT1-208ENST00000469476 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
TRIT1-208ENST00000469476 DSG3P32926 999 aa11.1□□□□□ -0.63
TRIT1-208ENST00000469476 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
TRIT1-208ENST00000469476 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
TRIT1-208ENST00000469476 NISCHQ9Y2I1 1504 aa10.98□□□□□ -0.65
TRIT1-208ENST00000469476 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
TRIT1-208ENST00000469476 PKD2Q13563 968 aa10.94□□□□□ -0.66
TRIT1-208ENST00000469476 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
TRIT1-208ENST00000469476 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
TRIT1-208ENST00000469476 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
TRIT1-208ENST00000469476 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
TRIT1-208ENST00000469476 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRIT1-208ENST00000469476 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
TRIT1-208ENST00000469476 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
TRIT1-208ENST00000469476 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
TRIT1-208ENST00000469476 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
TRIT1-208ENST00000469476 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
TRIT1-208ENST00000469476 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
TRIT1-208ENST00000469476 MIER1Q8N108 512 aa10.72□□□□□ -0.69
TRIT1-208ENST00000469476 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
TRIT1-208ENST00000469476 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRIT1-208ENST00000469476 RGL2O15211 777 aa10.66□□□□□ -0.7
TRIT1-208ENST00000469476 HAP1P54257 671 aaPredicted RBP10.64□□□□□ -0.71
TRIT1-208ENST00000469476 ABCC9O60706 1549 aa10.58□□□□□ -0.72
TRIT1-208ENST00000469476 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
TRIT1-208ENST00000469476 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
TRIT1-208ENST00000469476 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
TRIT1-208ENST00000469476 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
TRIT1-208ENST00000469476 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
TRIT1-208ENST00000469476 NUBP1P53384 320 aa10.48□□□□□ -0.73
TRIT1-208ENST00000469476 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
TRIT1-208ENST00000469476 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
TRIT1-208ENST00000469476 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
TRIT1-208ENST00000469476 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
TRIT1-208ENST00000469476 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
TRIT1-208ENST00000469476 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
TRIT1-208ENST00000469476 MNX1P50219 401 aaPredicted RBP10.44□□□□□ -0.74
TRIT1-208ENST00000469476 CREBZFQ9NS37 354 aa10.44□□□□□ -0.74
TRIT1-208ENST00000469476 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
TRIT1-208ENST00000469476 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
TRIT1-208ENST00000469476 REM2Q8IYK8 340 aaPredicted RBP10.41□□□□□ -0.74
TRIT1-208ENST00000469476 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
TRIT1-208ENST00000469476 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms