RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 NISCHQ9Y2I1 1504 aa8.91□□□□□ -0.98
SMC6-203ENST00000402989 CCDC180Q9P1Z9 1646 aa8.19□□□□□ -1.1
SMC6-203ENST00000402989 SHROOM4Q9ULL8 1493 aa7.86□□□□□ -1.15
SMC6-203ENST00000402989 DCAF8L2P0C7V8 631 aa7.75□□□□□ -1.17
SMC6-203ENST00000402989 DCAF1Q9Y4B6 1507 aa7.74□□□□□ -1.17
SMC6-203ENST00000402989 MYO15BQ96JP2 1530 aa7.73□□□□□ -1.17
SMC6-203ENST00000402989 SUPT5HO00267 1087 aaKnown RBP7.7□□□□□ -1.18
SMC6-203ENST00000402989 ZCCHC6Q5VYS8 1495 aaKnown RBP7.59□□□□□ -1.19
SMC6-203ENST00000402989 UNC13AQ9UPW8 1703 aa7.48□□□□□ -1.21
SMC6-203ENST00000402989 AEBP2Q6ZN18 517 aaPredicted RBP7.37□□□□□ -1.23
SMC6-203ENST00000402989 NACADO15069 1562 aa7.36□□□□□ -1.23
SMC6-203ENST00000402989 CHIC1Q5VXU3 224 aa7.31□□□□□ -1.24
SMC6-203ENST00000402989 EHMT2Q96KQ7 1210 aa7.24□□□□□ -1.25
SMC6-203ENST00000402989 BICRAQ9NZM4 1560 aa7.23□□□□□ -1.25
SMC6-203ENST00000402989 LOC105371045A0A1W2PR82 267 aa7.22□□□□□ -1.25
SMC6-203ENST00000402989 ABCC9O60706 1549 aa7.2□□□□□ -1.26
SMC6-203ENST00000402989 PCGF6Q9BYE7 350 aa7.19□□□□□ -1.26
SMC6-203ENST00000402989 SCRIBQ14160 1630 aa7.19□□□□□ -1.26
SMC6-203ENST00000402989 RB1CC1Q8TDY2 1594 aa7.18□□□□□ -1.26
SMC6-203ENST00000402989 FAM9AQ8IZU1 332 aaPredicted RBP7.18□□□□□ -1.26
SMC6-203ENST00000402989 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
SMC6-203ENST00000402989 TRIM41Q8WV44 630 aa7.09□□□□□ -1.28
SMC6-203ENST00000402989 PPARGC1BQ86YN6 1023 aaKnown RBP7.06□□□□□ -1.28
SMC6-203ENST00000402989 EIF4G1Q04637 1599 aaKnown RBP7.05□□□□□ -1.28
SMC6-203ENST00000402989 RSF1Q96T23 1441 aaPredicted RBP7.05□□□□□ -1.28
SMC6-203ENST00000402989 HRCP23327 699 aa7.04□□□□□ -1.28
SMC6-203ENST00000402989 CECR2Q9BXF3 1484 aa7.01□□□□□ -1.29
SMC6-203ENST00000402989 PRDM2Q13029 1718 aa6.99□□□□□ -1.29
SMC6-203ENST00000402989 TTBK1Q5TCY1 1321 aaPredicted RBP6.98□□□□□ -1.29
SMC6-203ENST00000402989 PABPN1Q86U42 306 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMC6-203ENST00000402989 MROH2BQ7Z745 1585 aa6.95□□□□□ -1.3
SMC6-203ENST00000402989 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
SMC6-203ENST00000402989 SMARCA4P51532 1647 aa6.93□□□□□ -1.3
SMC6-203ENST00000402989 WIZO95785 1651 aa6.92□□□□□ -1.3
SMC6-203ENST00000402989 BAZ1AQ9NRL2 1556 aaPredicted RBP6.92□□□□□ -1.3
SMC6-203ENST00000402989 SMARCA2P51531 1590 aa6.9□□□□□ -1.3
SMC6-203ENST00000402989 HMGXB3Q12766 1538 aa6.86□□□□□ -1.31
SMC6-203ENST00000402989 RANGAP1P46060 587 aaPredicted RBP6.84□□□□□ -1.31
SMC6-203ENST00000402989 ABCC8Q09428 1581 aa6.82□□□□□ -1.32
SMC6-203ENST00000402989 UBTFP17480 764 aaKnown RBP6.81□□□□□ -1.32
SMC6-203ENST00000402989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.79□□□□□ -1.32
SMC6-203ENST00000402989 TOP2AP11388 1531 aaKnown RBP6.79□□□□□ -1.32
SMC6-203ENST00000402989 CCDC88BA6NC98 1476 aa6.77□□□□□ -1.33
SMC6-203ENST00000402989 CCER1Q8TC90 406 aaPredicted RBP6.76□□□□□ -1.33
SMC6-203ENST00000402989 SOGA1O94964 1423 aa6.75□□□□□ -1.33
SMC6-203ENST00000402989 RUSC2Q8N2Y8 1516 aa6.72□□□□□ -1.33
SMC6-203ENST00000402989 NCAPD3P42695 1498 aa6.72□□□□□ -1.33
SMC6-203ENST00000402989 ZEB1P37275 1124 aaPredicted RBP6.72□□□□□ -1.33
SMC6-203ENST00000402989 CSRNP3Q8WYN3 585 aa6.71□□□□□ -1.34
SMC6-203ENST00000402989 WDR97A6NE52 1622 aa6.69□□□□□ -1.34
SMC6-203ENST00000402989 CEP162Q5TB80 1403 aa6.68□□□□□ -1.34
SMC6-203ENST00000402989 BIVM-ERCC5R4GMW8 1640 aa6.68□□□□□ -1.34
SMC6-203ENST00000402989 HNRNPUL2Q1KMD3 747 aaKnown RBP6.68□□□□□ -1.34
SMC6-203ENST00000402989 ATAD2BQ9ULI0 1458 aa6.66□□□□□ -1.34
SMC6-203ENST00000402989 WRNQ14191 1432 aaPredicted RBP eCLIP6.66□□□□□ -1.34
SMC6-203ENST00000402989 CC2D2AQ9P2K1 1620 aa6.65□□□□□ -1.34
SMC6-203ENST00000402989 BAZ1BQ9UIG0 1483 aaKnown RBP6.64□□□□□ -1.35
SMC6-203ENST00000402989 APLP2Q06481 763 aa6.64□□□□□ -1.35
SMC6-203ENST00000402989 TNIKQ9UKE5 1360 aa6.61□□□□□ -1.35
SMC6-203ENST00000402989 GOLGA3Q08378 1498 aa6.6□□□□□ -1.35
SMC6-203ENST00000402989 SYNJ1O43426 1573 aa6.6□□□□□ -1.35
SMC6-203ENST00000402989 CLIP1P30622 1438 aa6.58□□□□□ -1.36
SMC6-203ENST00000402989 ITGAEP38570 1179 aa6.58□□□□□ -1.36
SMC6-203ENST00000402989 YTHDC1Q96MU7 727 aaKnown RBP6.56□□□□□ -1.36
SMC6-203ENST00000402989 EEA1Q15075 1411 aa6.56□□□□□ -1.36
SMC6-203ENST00000402989 DIEXFQ68CQ4 756 aaKnown RBP6.56□□□□□ -1.36
SMC6-203ENST00000402989 RAPGEF2Q9Y4G8 1499 aa6.56□□□□□ -1.36
SMC6-203ENST00000402989 ATP1B4Q9UN42 357 aaPredicted RBP6.55□□□□□ -1.36
SMC6-203ENST00000402989 LAMC3Q9Y6N6 1575 aa6.55□□□□□ -1.36
SMC6-203ENST00000402989 CEP164Q9UPV0 1460 aa6.55□□□□□ -1.36
SMC6-203ENST00000402989 SCAF1Q9H7N4 1312 aaKnown RBP6.53□□□□□ -1.36
SMC6-203ENST00000402989 THOC2Q8NI27 1593 aaKnown RBP6.53□□□□□ -1.36
SMC6-203ENST00000402989 SENP3Q9H4L4 574 aaPredicted RBP6.53□□□□□ -1.36
SMC6-203ENST00000402989 CFTRP13569 1480 aa6.53□□□□□ -1.36
SMC6-203ENST00000402989 TOP2BQ02880 1626 aa6.52□□□□□ -1.37
SMC6-203ENST00000402989 P3H3Q8IVL6 736 aa6.52□□□□□ -1.37
SMC6-203ENST00000402989 KIF21AQ7Z4S6 1674 aa6.5□□□□□ -1.37
SMC6-203ENST00000402989 NEUROD1Q13562 356 aa6.49□□□□□ -1.37
SMC6-203ENST00000402989 KANK4Q5T7N3 995 aaPredicted RBP6.49□□□□□ -1.37
SMC6-203ENST00000402989 VPS8Q8N3P4 1428 aa6.49□□□□□ -1.37
SMC6-203ENST00000402989 ZNF316A6NFI3 1004 aaPredicted RBP6.48□□□□□ -1.37
SMC6-203ENST00000402989 TARBP1Q13395 1621 aaKnown RBP6.47□□□□□ -1.37
SMC6-203ENST00000402989 KIF21BO75037 1637 aa6.47□□□□□ -1.37
SMC6-203ENST00000402989 PHF23Q9BUL5 403 aaPredicted RBP6.47□□□□□ -1.37
SMC6-203ENST00000402989 ABCA5Q8WWZ7 1642 aa6.46□□□□□ -1.38
SMC6-203ENST00000402989 CUX1P39880 1505 aa6.46□□□□□ -1.38
SMC6-203ENST00000402989 WDR62O43379 1518 aa6.45□□□□□ -1.38
SMC6-203ENST00000402989 KIF27Q86VH2 1401 aa6.45□□□□□ -1.38
SMC6-203ENST00000402989 ACIN1Q9UKV3 1341 aaKnown RBP6.45□□□□□ -1.38
SMC6-203ENST00000402989 CENPBP07199 599 aaPredicted RBP6.45□□□□□ -1.38
SMC6-203ENST00000402989 GTF3C3Q9Y5Q9 886 aa6.45□□□□□ -1.38
SMC6-203ENST00000402989 CUX2O14529 1486 aa6.44□□□□□ -1.38
SMC6-203ENST00000402989 MIER1Q8N108 512 aa6.43□□□□□ -1.38
SMC6-203ENST00000402989 FAM50AQ14320 339 aaKnown RBP6.43□□□□□ -1.38
SMC6-203ENST00000402989 ARAP1Q96P48 1450 aa6.42□□□□□ -1.38
SMC6-203ENST00000402989 PRXQ9BXM0 1461 aa6.4□□□□□ -1.38
SMC6-203ENST00000402989 DNMBPQ6XZF7 1577 aa6.4□□□□□ -1.39
SMC6-203ENST00000402989 ARID3CA6NKF2 412 aa6.39□□□□□ -1.39
SMC6-203ENST00000402989 CARMIL1Q5VZK9 1371 aa6.38□□□□□ -1.39
SMC6-203ENST00000402989 CADPSQ9ULU8 1353 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms