RNA–Protein interactions for RNA: ENST00000562049.1

AL136537.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136537.2, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136537.2-201ENST00000562049 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
AL136537.2-201ENST00000562049 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
AL136537.2-201ENST00000562049 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
AL136537.2-201ENST00000562049 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
AL136537.2-201ENST00000562049 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
AL136537.2-201ENST00000562049 FOXD1Q16676 465 aa12.49□□□□□ -0.41
AL136537.2-201ENST00000562049 MSH5O43196 834 aa12.06□□□□□ -0.48
AL136537.2-201ENST00000562049 PIAS4Q8N2W9 510 aaPredicted RBP11.58□□□□□ -0.56
AL136537.2-201ENST00000562049 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
AL136537.2-201ENST00000562049 PPP6R1Q9UPN7 881 aa11.19□□□□□ -0.62
AL136537.2-201ENST00000562049 ADRA2BP18089 450 aa11.14□□□□□ -0.63
AL136537.2-201ENST00000562049 CACNB1Q02641 598 aaPredicted RBP10.58□□□□□ -0.72
AL136537.2-201ENST00000562049 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
AL136537.2-201ENST00000562049 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
AL136537.2-201ENST00000562049 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
AL136537.2-201ENST00000562049 RNF39Q9H2S5 420 aa10.15□□□□□ -0.78
AL136537.2-201ENST00000562049 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
AL136537.2-201ENST00000562049 PPP4R3CPQ6ZMV5 832 aa10.06□□□□□ -0.8
AL136537.2-201ENST00000562049 C1QBPQ07021 282 aaKnown RBP10.06□□□□□ -0.8
AL136537.2-201ENST00000562049 HOXD11P31277 338 aaPredicted RBP9.99□□□□□ -0.81
AL136537.2-201ENST00000562049 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.83
AL136537.2-201ENST00000562049 CNKSR2Q8WXI2 1034 aa9.86□□□□□ -0.83
AL136537.2-201ENST00000562049 NCBP3Q53F19 620 aaKnown RBP9.8□□□□□ -0.84
AL136537.2-201ENST00000562049 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
AL136537.2-201ENST00000562049 POTEHQ6S545 545 aa9.73□□□□□ -0.85
AL136537.2-201ENST00000562049 NPM3O75607 178 aaKnown RBP9.58□□□□□ -0.88
AL136537.2-201ENST00000562049 KCNA4P22459 653 aa9.55□□□□□ -0.88
AL136537.2-201ENST00000562049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.49□□□□□ -0.89
AL136537.2-201ENST00000562049 EHMT2Q96KQ7 1210 aa9.31□□□□□ -0.92
AL136537.2-201ENST00000562049 DSG3P32926 999 aa9.3□□□□□ -0.92
AL136537.2-201ENST00000562049 CAPN15O75808 1086 aa9.23□□□□□ -0.93
AL136537.2-201ENST00000562049 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
AL136537.2-201ENST00000562049 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
AL136537.2-201ENST00000562049 APLP2Q06481 763 aa9.12□□□□□ -0.95
AL136537.2-201ENST00000562049 SLC4A1APQ9BWU0 796 aaKnown RBP9.09□□□□□ -0.95
AL136537.2-201ENST00000562049 SLC4A2P04920 1241 aa9.09□□□□□ -0.95
AL136537.2-201ENST00000562049 RBM42Q9BTD8 480 aaKnown RBP9.05□□□□□ -0.96
AL136537.2-201ENST00000562049 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
AL136537.2-201ENST00000562049 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
AL136537.2-201ENST00000562049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.96□□□□□ -0.97
AL136537.2-201ENST00000562049 HNRNPUL2Q1KMD3 747 aaKnown RBP8.96□□□□□ -0.97
AL136537.2-201ENST00000562049 CHRDL2Q6WN34 429 aa8.93□□□□□ -0.98
AL136537.2-201ENST00000562049 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
AL136537.2-201ENST00000562049 FOXD4L1Q9NU39 408 aa8.91□□□□□ -0.98
AL136537.2-201ENST00000562049 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
AL136537.2-201ENST00000562049 SP7Q8TDD2 431 aaPredicted RBP8.9□□□□□ -0.98
AL136537.2-201ENST00000562049 ABCB7O75027 752 aa8.9□□□□□ -0.99
AL136537.2-201ENST00000562049 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.99
AL136537.2-201ENST00000562049 ZBTB22O15209 634 aa8.77□□□□□ -1.01
AL136537.2-201ENST00000562049 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
AL136537.2-201ENST00000562049 AKT1S1Q96B36 256 aa8.68□□□□□ -1.02
AL136537.2-201ENST00000562049 ATF5Q9Y2D1 282 aaPredicted RBP8.59□□□□□ -1.03
AL136537.2-201ENST00000562049 HAX1O00165 279 aa8.57□□□□□ -1.04
AL136537.2-201ENST00000562049 POLA2Q14181 598 aa8.57□□□□□ -1.04
AL136537.2-201ENST00000562049 PIP4P2Q8N4L2 257 aa8.57□□□□□ -1.04
AL136537.2-201ENST00000562049 ZBTB12Q9Y330 459 aaPredicted RBP8.56□□□□□ -1.04
AL136537.2-201ENST00000562049 REM2Q8IYK8 340 aaPredicted RBP8.51□□□□□ -1.05
AL136537.2-201ENST00000562049 FXR2P51116 673 aaKnown RBP eCLIP8.48□□□□□ -1.05
AL136537.2-201ENST00000562049 PITPNM1O00562 1244 aa8.4□□□□□ -1.07
AL136537.2-201ENST00000562049 FBLN2P98095 1184 aa8.34□□□□□ -1.07
AL136537.2-201ENST00000562049 LHX8Q68G74 356 aa8.33□□□□□ -1.08
AL136537.2-201ENST00000562049 OSCARQ8IYS5 282 aa8.3□□□□□ -1.08
AL136537.2-201ENST00000562049 EVX2Q03828 476 aa8.3□□□□□ -1.08
AL136537.2-201ENST00000562049 AMER1Q5JTC6 1135 aaPredicted RBP8.26□□□□□ -1.09
AL136537.2-201ENST00000562049 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
AL136537.2-201ENST00000562049 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
AL136537.2-201ENST00000562049 SPDYE2BA6NHP3 402 aa8.21□□□□□ -1.09
AL136537.2-201ENST00000562049 SPDYE6P0CI01 402 aa8.21□□□□□ -1.09
AL136537.2-201ENST00000562049 SPDYE2Q495Y8 402 aa8.21□□□□□ -1.09
AL136537.2-201ENST00000562049 GABBR2O75899 941 aa8.2□□□□□ -1.1
AL136537.2-201ENST00000562049 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
AL136537.2-201ENST00000562049 PRKAR2AP13861 404 aaKnown RBP8.19□□□□□ -1.1
AL136537.2-201ENST00000562049 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
AL136537.2-201ENST00000562049 PLSCR2Q9NRY7 297 aa8.18□□□□□ -1.1
AL136537.2-201ENST00000562049 SPDYE1Q8NFV5 336 aaPredicted RBP8.17□□□□□ -1.1
AL136537.2-201ENST00000562049 CLCN6P51797 869 aa8.13□□□□□ -1.11
AL136537.2-201ENST00000562049 FKBP8Q14318 412 aa8.12□□□□□ -1.11
AL136537.2-201ENST00000562049 SSUH2Q9Y2M2 353 aa8.11□□□□□ -1.11
AL136537.2-201ENST00000562049 ZNF692Q9BU19 519 aaPredicted RBP8.11□□□□□ -1.11
AL136537.2-201ENST00000562049 CLEC11AQ9Y240 323 aa8.06□□□□□ -1.12
AL136537.2-201ENST00000562049 SPDYE4A6NLX3 237 aa7.98□□□□□ -1.13
AL136537.2-201ENST00000562049 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
AL136537.2-201ENST00000562049 POTEIP0CG38 1075 aa7.96□□□□□ -1.14
AL136537.2-201ENST00000562049 PCDH10Q9P2E7 1040 aa7.94□□□□□ -1.14
AL136537.2-201ENST00000562049 DCBLD2Q96PD2 775 aa7.92□□□□□ -1.14
AL136537.2-201ENST00000562049 PRR29P0C7W0 189 aa7.91□□□□□ -1.14
AL136537.2-201ENST00000562049 CD44P16070 742 aaKnown RBP7.91□□□□□ -1.14
AL136537.2-201ENST00000562049 CHADLQ6NUI6 762 aa7.9□□□□□ -1.14
AL136537.2-201ENST00000562049 STAG3Q9UJ98 1225 aa7.89□□□□□ -1.15
AL136537.2-201ENST00000562049 PROM2Q8N271 834 aa7.86□□□□□ -1.15
AL136537.2-201ENST00000562049 POTEMA6NI47 508 aa7.85□□□□□ -1.15
AL136537.2-201ENST00000562049 FARP1Q9Y4F1 1045 aaPredicted RBP7.83□□□□□ -1.16
AL136537.2-201ENST00000562049 ZNF579Q8NAF0 562 aaKnown RBP7.82□□□□□ -1.16
AL136537.2-201ENST00000562049 POTEGQ6S5H5 508 aa7.8□□□□□ -1.16
AL136537.2-201ENST00000562049 OTUD5Q96G74 571 aa7.79□□□□□ -1.16
AL136537.2-201ENST00000562049 FBXO3Q9UK99 471 aa7.77□□□□□ -1.17
AL136537.2-201ENST00000562049 ZRANB1Q9UGI0 708 aa7.72□□□□□ -1.17
AL136537.2-201ENST00000562049 CREBZFQ9NS37 354 aa7.71□□□□□ -1.17
AL136537.2-201ENST00000562049 MAMSTRQ6ZN01 415 aa7.69□□□□□ -1.18
AL136537.2-201ENST00000562049 PAK3O75914 559 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms