RNA–Protein interactions for RNA: ENST00000347486.8

SUPT6H-202, Transcript of SPT6 homolog, histone chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT6H, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-202ENST00000347486 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
SUPT6H-202ENST00000347486 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
SUPT6H-202ENST00000347486 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
SUPT6H-202ENST00000347486 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
SUPT6H-202ENST00000347486 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
SUPT6H-202ENST00000347486 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
SUPT6H-202ENST00000347486 APLP2Q06481 763 aa14.87□□□□□ -0.03
SUPT6H-202ENST00000347486 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
SUPT6H-202ENST00000347486 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
SUPT6H-202ENST00000347486 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
SUPT6H-202ENST00000347486 PCGF6Q9BYE7 350 aa14.47□□□□□ -0.09
SUPT6H-202ENST00000347486 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
SUPT6H-202ENST00000347486 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
SUPT6H-202ENST00000347486 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
SUPT6H-202ENST00000347486 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
SUPT6H-202ENST00000347486 CENPBP07199 599 aaPredicted RBP14.28□□□□□ -0.12
SUPT6H-202ENST00000347486 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
SUPT6H-202ENST00000347486 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
SUPT6H-202ENST00000347486 NEFLP07196 543 aa14.07□□□□□ -0.16
SUPT6H-202ENST00000347486 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
SUPT6H-202ENST00000347486 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
SUPT6H-202ENST00000347486 MYT1Q01538 1121 aa13.92□□□□□ -0.18
SUPT6H-202ENST00000347486 MYT1LQ9UL68 1186 aa13.9□□□□□ -0.18
SUPT6H-202ENST00000347486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
SUPT6H-202ENST00000347486 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
SUPT6H-202ENST00000347486 ITGAEP38570 1179 aa13.85□□□□□ -0.19
SUPT6H-202ENST00000347486 POLR3GLQ9BT43 218 aa13.83□□□□□ -0.2
SUPT6H-202ENST00000347486 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
SUPT6H-202ENST00000347486 DAXXQ9UER7 740 aaPredicted RBP13.73□□□□□ -0.21
SUPT6H-202ENST00000347486 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.22
SUPT6H-202ENST00000347486 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
SUPT6H-202ENST00000347486 HRCP23327 699 aa13.63□□□□□ -0.23
SUPT6H-202ENST00000347486 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
SUPT6H-202ENST00000347486 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
SUPT6H-202ENST00000347486 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
SUPT6H-202ENST00000347486 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
SUPT6H-202ENST00000347486 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
SUPT6H-202ENST00000347486 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
SUPT6H-202ENST00000347486 DIEXFQ68CQ4 756 aaKnown RBP13.36□□□□□ -0.27
SUPT6H-202ENST00000347486 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
SUPT6H-202ENST00000347486 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
SUPT6H-202ENST00000347486 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.284e-7■■□□□ 14
SUPT6H-202ENST00000347486 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
SUPT6H-202ENST00000347486 ABCC9O60706 1549 aa13.29□□□□□ -0.28
SUPT6H-202ENST00000347486 FBLN2P98095 1184 aa13.25□□□□□ -0.29
SUPT6H-202ENST00000347486 BCANQ96GW7 911 aa13.2□□□□□ -0.3
SUPT6H-202ENST00000347486 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
SUPT6H-202ENST00000347486 ANP32CO43423 234 aa13.19□□□□□ -0.3
SUPT6H-202ENST00000347486 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
SUPT6H-202ENST00000347486 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
SUPT6H-202ENST00000347486 ARID3CA6NKF2 412 aa13.11□□□□□ -0.31
SUPT6H-202ENST00000347486 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
SUPT6H-202ENST00000347486 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
SUPT6H-202ENST00000347486 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
SUPT6H-202ENST00000347486 CCDC180Q9P1Z9 1646 aa13.08□□□□□ -0.32
SUPT6H-202ENST00000347486 NEFMP07197 916 aa13.08□□□□□ -0.32
SUPT6H-202ENST00000347486 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
SUPT6H-202ENST00000347486 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
SUPT6H-202ENST00000347486 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
SUPT6H-202ENST00000347486 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
SUPT6H-202ENST00000347486 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
SUPT6H-202ENST00000347486 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
SUPT6H-202ENST00000347486 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
SUPT6H-202ENST00000347486 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
SUPT6H-202ENST00000347486 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
SUPT6H-202ENST00000347486 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
SUPT6H-202ENST00000347486 NPM1P06748 294 aaKnown RBP eCLIP12.81□□□□□ -0.36
SUPT6H-202ENST00000347486 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
SUPT6H-202ENST00000347486 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
SUPT6H-202ENST00000347486 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
SUPT6H-202ENST00000347486 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
SUPT6H-202ENST00000347486 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.37
SUPT6H-202ENST00000347486 FKBP8Q14318 412 aa12.77□□□□□ -0.37
SUPT6H-202ENST00000347486 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
SUPT6H-202ENST00000347486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.372e-8■■■■□ 20.3
SUPT6H-202ENST00000347486 CHIC2Q9UKJ5 165 aa12.74□□□□□ -0.37
SUPT6H-202ENST00000347486 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
SUPT6H-202ENST00000347486 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
SUPT6H-202ENST00000347486 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
SUPT6H-202ENST00000347486 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
SUPT6H-202ENST00000347486 TMC1Q8TDI8 760 aa12.69□□□□□ -0.38
SUPT6H-202ENST00000347486 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
SUPT6H-202ENST00000347486 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
SUPT6H-202ENST00000347486 NACADO15069 1562 aa12.66□□□□□ -0.38
SUPT6H-202ENST00000347486 TSPY4P0CV99 314 aa12.66□□□□□ -0.38
SUPT6H-202ENST00000347486 TSPY10P0CW01 314 aa12.66□□□□□ -0.38
SUPT6H-202ENST00000347486 WDR43Q15061 677 aaKnown RBP eCLIP12.66□□□□□ -0.384e-6■□□□□ 9.3
SUPT6H-202ENST00000347486 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
SUPT6H-202ENST00000347486 SCAF1Q9H7N4 1312 aaKnown RBP12.65□□□□□ -0.38
SUPT6H-202ENST00000347486 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
SUPT6H-202ENST00000347486 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
SUPT6H-202ENST00000347486 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
SUPT6H-202ENST00000347486 DCAF1Q9Y4B6 1507 aa12.6□□□□□ -0.39
SUPT6H-202ENST00000347486 A0A0G2JS52 829 aa12.6□□□□□ -0.39
SUPT6H-202ENST00000347486 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
SUPT6H-202ENST00000347486 SENP3Q9H4L4 574 aaPredicted RBP12.58□□□□□ -0.4
SUPT6H-202ENST00000347486 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
SUPT6H-202ENST00000347486 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
SUPT6H-202ENST00000347486 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
SUPT6H-202ENST00000347486 ARXQ96QS3 562 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms