RNA–Protein interactions for RNA: ENST00000486993.1

SGPL1-204, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 1 (best)

Gene SGPL1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-204ENST00000486993 NISCHQ9Y2I1 1504 aa50.36■■■■■ 5.65
SGPL1-204ENST00000486993 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
SGPL1-204ENST00000486993 ABCC9O60706 1549 aa44.34■■■■■ 4.69
SGPL1-204ENST00000486993 DCAF8L2P0C7V8 631 aa42.48■■■■■ 4.39
SGPL1-204ENST00000486993 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.38
SGPL1-204ENST00000486993 NACADO15069 1562 aa42.27■■■■■ 4.36
SGPL1-204ENST00000486993 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
SGPL1-204ENST00000486993 MYO15BQ96JP2 1530 aa41.81■■■■■ 4.28
SGPL1-204ENST00000486993 DCAF1Q9Y4B6 1507 aa41.56■■■■■ 4.24
SGPL1-204ENST00000486993 UNC13AQ9UPW8 1703 aa41.47■■■■■ 4.23
SGPL1-204ENST00000486993 PABPN1Q86U42 306 aaKnown RBP eCLIP41.43■■■■■ 4.22
SGPL1-204ENST00000486993 BICRAQ9NZM4 1560 aa41.12■■■■■ 4.17
SGPL1-204ENST00000486993 SCRIBQ14160 1630 aa41.05■■■■■ 4.16
SGPL1-204ENST00000486993 DNAJC5BQ9UF47 199 aa40.93■■■■■ 4.14
SGPL1-204ENST00000486993 SHROOM4Q9ULL8 1493 aa40.57■■■■■ 4.08
SGPL1-204ENST00000486993 EIF4G1Q04637 1599 aaKnown RBP40.1■■■■■ 4.01
SGPL1-204ENST00000486993 CC2D2AQ9P2K1 1620 aa40.03■■■■■ 4
SGPL1-204ENST00000486993 CECR2Q9BXF3 1484 aa39.83■■■■□ 3.97
SGPL1-204ENST00000486993 SMARCA4P51532 1647 aa39.16■■■■□ 3.86
SGPL1-204ENST00000486993 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
SGPL1-204ENST00000486993 ATAD2BQ9ULI0 1458 aa39.01■■■■□ 3.84
SGPL1-204ENST00000486993 NCAPD3P42695 1498 aa38.99■■■■□ 3.83
SGPL1-204ENST00000486993 SMARCA2P51531 1590 aa38.95■■■■□ 3.83
SGPL1-204ENST00000486993 MROH2BQ7Z745 1585 aa38.84■■■■□ 3.81
SGPL1-204ENST00000486993 HMGXB3Q12766 1538 aa38.77■■■■□ 3.8
SGPL1-204ENST00000486993 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
SGPL1-204ENST00000486993 PEG3Q9GZU2 1588 aa38.69■■■■□ 3.78
SGPL1-204ENST00000486993 WIZO95785 1651 aa38.44■■■■□ 3.74
SGPL1-204ENST00000486993 RSF1Q96T23 1441 aaPredicted RBP38.28■■■■□ 3.72
SGPL1-204ENST00000486993 ERCC6Q03468 1493 aa38.26■■■■□ 3.72
SGPL1-204ENST00000486993 NESP48681 1621 aa38.26■■■■□ 3.71
SGPL1-204ENST00000486993 LAMC3Q9Y6N6 1575 aa38.04■■■■□ 3.68
SGPL1-204ENST00000486993 TOP2AP11388 1531 aaKnown RBP37.96■■■■□ 3.67
SGPL1-204ENST00000486993 CADPSQ9ULU8 1353 aa37.89■■■■□ 3.66
SGPL1-204ENST00000486993 PDS5BQ9NTI5 1447 aa37.84■■■■□ 3.65
SGPL1-204ENST00000486993 CUX2O14529 1486 aa37.84■■■■□ 3.65
SGPL1-204ENST00000486993 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
SGPL1-204ENST00000486993 THOC2Q8NI27 1593 aaKnown RBP37.67■■■■□ 3.62
SGPL1-204ENST00000486993 CFTRP13569 1480 aa37.58■■■■□ 3.61
SGPL1-204ENST00000486993 CCDC88BA6NC98 1476 aa37.56■■■■□ 3.6
SGPL1-204ENST00000486993 FANCD2Q9BXW9 1451 aa37.49■■■■□ 3.59
SGPL1-204ENST00000486993 CEP164Q9UPV0 1460 aa37.47■■■■□ 3.59
SGPL1-204ENST00000486993 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
SGPL1-204ENST00000486993 WDR62O43379 1518 aa37.31■■■■□ 3.56
SGPL1-204ENST00000486993 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
SGPL1-204ENST00000486993 PRDM2Q13029 1718 aa37.28■■■■□ 3.56
SGPL1-204ENST00000486993 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
SGPL1-204ENST00000486993 DNAJC5Q9H3Z4 198 aa37.07■■■■□ 3.52
SGPL1-204ENST00000486993 TOPBP1Q92547 1522 aa36.84■■■■□ 3.49
SGPL1-204ENST00000486993 ABCC8Q09428 1581 aa36.78■■■■□ 3.48
SGPL1-204ENST00000486993 DNMBPQ6XZF7 1577 aa36.76■■■■□ 3.48
SGPL1-204ENST00000486993 IFT140Q96RY7 1462 aa36.67■■■■□ 3.46
SGPL1-204ENST00000486993 ZNF608Q9ULD9 1512 aaPredicted RBP36.56■■■■□ 3.44
SGPL1-204ENST00000486993 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
SGPL1-204ENST00000486993 CUX1P39880 1505 aa36.45■■■■□ 3.43
SGPL1-204ENST00000486993 TARBP1Q13395 1621 aaKnown RBP36.43■■■■□ 3.42
SGPL1-204ENST00000486993 RAD54L2Q9Y4B4 1467 aa36.41■■■■□ 3.42
SGPL1-204ENST00000486993 FGD5Q6ZNL6 1462 aa36.4■■■■□ 3.42
SGPL1-204ENST00000486993 SOGA1O94964 1423 aa36.4■■■■□ 3.42
SGPL1-204ENST00000486993 EIF4G3O43432 1585 aaKnown RBP36.39■■■■□ 3.42
SGPL1-204ENST00000486993 AQRO60306 1485 aaKnown RBP eCLIP36.36■■■■□ 3.41
SGPL1-204ENST00000486993 OSCARQ8IYS5 282 aa36.31■■■■□ 3.4
SGPL1-204ENST00000486993 TDRD9Q8NDG6 1382 aaKnown RBP36.25■■■■□ 3.39
SGPL1-204ENST00000486993 WRNQ14191 1432 aaPredicted RBP eCLIP36.13■■■■□ 3.373e-76■■■■■ 50.5
SGPL1-204ENST00000486993 FBLN2P98095 1184 aa36.1■■■■□ 3.37
SGPL1-204ENST00000486993 WDR97A6NE52 1622 aa36.06■■■■□ 3.36
SGPL1-204ENST00000486993 SYNJ1O43426 1573 aa36.06■■■■□ 3.36
SGPL1-204ENST00000486993 TOP2BQ02880 1626 aa36.04■■■■□ 3.36
SGPL1-204ENST00000486993 BIVM-ERCC5R4GMW8 1640 aa36.03■■■■□ 3.36
SGPL1-204ENST00000486993 CHD1O14646 1710 aa36.02■■■■□ 3.36
SGPL1-204ENST00000486993 SNAPC4Q5SXM2 1469 aa35.99■■■■□ 3.35
SGPL1-204ENST00000486993 ABCA10Q8WWZ4 1543 aa35.98■■■■□ 3.35
SGPL1-204ENST00000486993 GRIN2BQ13224 1484 aa35.97■■■■□ 3.35
SGPL1-204ENST00000486993 GAPVD1Q14C86 1478 aa35.95■■■■□ 3.35
SGPL1-204ENST00000486993 TRIM41Q8WV44 630 aa35.91■■■■□ 3.34
SGPL1-204ENST00000486993 PBRM1Q86U86 1689 aa35.9■■■■□ 3.34
SGPL1-204ENST00000486993 CHMP7Q8WUX9 453 aaPredicted RBP35.88■■■■□ 3.33
SGPL1-204ENST00000486993 MAGI1Q96QZ7 1491 aaPredicted RBP35.87■■■■□ 3.33
SGPL1-204ENST00000486993 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
SGPL1-204ENST00000486993 SYNJ2O15056 1496 aa35.76■■■■□ 3.32
SGPL1-204ENST00000486993 RIMBP3CA6NJZ7 1639 aa35.72■■■■□ 3.31
SGPL1-204ENST00000486993 RIMBP3BA6NNM3 1639 aa35.72■■■■□ 3.31
SGPL1-204ENST00000486993 RIMBP3Q9UFD9 1639 aa35.72■■■■□ 3.31
SGPL1-204ENST00000486993 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
SGPL1-204ENST00000486993 ADAMTS12P58397 1594 aa35.55■■■■□ 3.28
SGPL1-204ENST00000486993 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
SGPL1-204ENST00000486993 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
SGPL1-204ENST00000486993 GRIN2AQ12879 1464 aa35.5■■■■□ 3.27
SGPL1-204ENST00000486993 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
SGPL1-204ENST00000486993 CYB5RLQ6IPT4 315 aa35.47■■■■□ 3.27
SGPL1-204ENST00000486993 KIF27Q86VH2 1401 aa35.4■■■■□ 3.26
SGPL1-204ENST00000486993 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
SGPL1-204ENST00000486993 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
SGPL1-204ENST00000486993 NUP160Q12769 1436 aa35.31■■■■□ 3.24
SGPL1-204ENST00000486993 IGF1RP08069 1367 aa35.27■■■■□ 3.24
SGPL1-204ENST00000486993 CUL7Q14999 1698 aa35.18■■■■□ 3.22
SGPL1-204ENST00000486993 ERCC6L2Q5T890 1561 aa35.1■■■■□ 3.21
SGPL1-204ENST00000486993 CARMIL1Q5VZK9 1371 aa35.1■■■■□ 3.21
SGPL1-204ENST00000486993 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
SGPL1-204ENST00000486993 JPH4Q96JJ6 628 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms