Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S2P59780 AC137767.1-201ENST00000602918 1920 ntBASIC19.8■□□□□ 0.76
AP3S2P59780 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
AP3S2P59780 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S2P59780 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP3S2P59780 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3S2P59780 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S2P59780 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S2P59780 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3S2P59780 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 HLA-L-211ENST00000482052 1765 ntBASIC19.78■□□□□ 0.76
AP3S2P59780 LINC00526-201ENST00000581067 1875 ntBASIC19.78■□□□□ 0.76
AP3S2P59780 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3S2P59780 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3S2P59780 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S2P59780 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S2P59780 MIR219A2-201ENST00000608502 1504 ntBASIC19.77■□□□□ 0.76
AP3S2P59780 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S2P59780 AC008813.1-201ENST00000536597 885 ntBASIC19.77■□□□□ 0.76
AP3S2P59780 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S2P59780 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3S2P59780 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S2P59780 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3S2P59780 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3S2P59780 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
AP3S2P59780 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3S2P59780 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AP3S2P59780 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.76■□□□□ 0.75
AP3S2P59780 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3S2P59780 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.76■□□□□ 0.75
AP3S2P59780 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
AP3S2P59780 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3S2P59780 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S2P59780 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S2P59780 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3S2P59780 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.74■□□□□ 0.75
AP3S2P59780 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
AP3S2P59780 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
AP3S2P59780 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
AP3S2P59780 AC148477.6-201ENST00000623746 465 ntBASIC19.74■□□□□ 0.75
AP3S2P59780 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S2P59780 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S2P59780 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3S2P59780 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
AP3S2P59780 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
AP3S2P59780 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
AP3S2P59780 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP3S2P59780 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP3S2P59780 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
AP3S2P59780 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP3S2P59780 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
AP3S2P59780 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.72■□□□□ 0.75
AP3S2P59780 GUSBP5-202ENST00000510805 1989 ntBASIC19.72■□□□□ 0.75
AP3S2P59780 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S2P59780 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
AP3S2P59780 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S2P59780 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
AP3S2P59780 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S2P59780 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.71■□□□□ 0.75
AP3S2P59780 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S2P59780 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S2P59780 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S2P59780 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms