Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 MIR6821-201ENST00000617625 74 ntBASIC23.08■■□□□ 1.29
BCKDHBP21953 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BCKDHBP21953 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
BCKDHBP21953 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.08■■□□□ 1.28
BCKDHBP21953 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHBP21953 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.07■■□□□ 1.28
BCKDHBP21953 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.07■■□□□ 1.28
BCKDHBP21953 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.07■■□□□ 1.28
BCKDHBP21953 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHBP21953 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
BCKDHBP21953 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHBP21953 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BCKDHBP21953 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHBP21953 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHBP21953 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHBP21953 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHBP21953 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.06■■□□□ 1.28
BCKDHBP21953 SERBP1P1-201ENST00000396021 1160 ntBASIC23.06■■□□□ 1.28
BCKDHBP21953 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.06■■□□□ 1.28
BCKDHBP21953 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.06■■□□□ 1.28
BCKDHBP21953 AC087623.3-201ENST00000607047 1098 ntBASIC23.06■■□□□ 1.28
BCKDHBP21953 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHBP21953 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BCKDHBP21953 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.06■■□□□ 1.28
BCKDHBP21953 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHBP21953 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.05■■□□□ 1.28
BCKDHBP21953 CA15P2-201ENST00000611168 834 ntBASIC23.05■■□□□ 1.28
BCKDHBP21953 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHBP21953 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BCKDHBP21953 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
BCKDHBP21953 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.04■■□□□ 1.28
BCKDHBP21953 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
BCKDHBP21953 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHBP21953 AC097381.1-201ENST00000429019 1296 ntBASIC23.04■■□□□ 1.28
BCKDHBP21953 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHBP21953 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
BCKDHBP21953 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
BCKDHBP21953 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.03■■□□□ 1.28
BCKDHBP21953 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHBP21953 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHBP21953 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.03■■□□□ 1.28
BCKDHBP21953 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
BCKDHBP21953 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.03■■□□□ 1.28
BCKDHBP21953 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHBP21953 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BCKDHBP21953 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
BCKDHBP21953 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHBP21953 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHBP21953 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.02■■□□□ 1.28
BCKDHBP21953 AC099791.2-201ENST00000605725 427 ntBASIC23.02■■□□□ 1.28
BCKDHBP21953 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHBP21953 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHBP21953 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.02■■□□□ 1.28
BCKDHBP21953 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BCKDHBP21953 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.01■■□□□ 1.27
BCKDHBP21953 AL162430.1-201ENST00000480705 870 ntBASIC23.01■■□□□ 1.27
BCKDHBP21953 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.01■■□□□ 1.27
BCKDHBP21953 AC092171.4-201ENST00000609130 632 ntBASIC23.01■■□□□ 1.27
BCKDHBP21953 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.01■■□□□ 1.27
BCKDHBP21953 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BCKDHBP21953 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.01■■□□□ 1.27
BCKDHBP21953 RASA4CP-201ENST00000424092 1398 ntBASIC23.01■■□□□ 1.27
BCKDHBP21953 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23■■□□□ 1.27
BCKDHBP21953 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23■■□□□ 1.27
BCKDHBP21953 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23■■□□□ 1.27
BCKDHBP21953 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23■■□□□ 1.27
BCKDHBP21953 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23■■□□□ 1.27
BCKDHBP21953 AC010501.1-201ENST00000606270 1962 ntBASIC23■■□□□ 1.27
BCKDHBP21953 AC131274.2-201ENST00000580697 1507 ntBASIC23■■□□□ 1.27
BCKDHBP21953 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23■■□□□ 1.27
BCKDHBP21953 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
BCKDHBP21953 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHBP21953 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.99■■□□□ 1.27
BCKDHBP21953 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHBP21953 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BCKDHBP21953 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
BCKDHBP21953 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHBP21953 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHBP21953 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
BCKDHBP21953 AC027682.1-201ENST00000562846 899 ntBASIC22.98■■□□□ 1.27
BCKDHBP21953 AC008764.7-201ENST00000593779 1081 ntBASIC22.98■■□□□ 1.27
BCKDHBP21953 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
BCKDHBP21953 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.97■■□□□ 1.27
BCKDHBP21953 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
BCKDHBP21953 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
BCKDHBP21953 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.97■■□□□ 1.27
BCKDHBP21953 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
BCKDHBP21953 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
BCKDHBP21953 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
BCKDHBP21953 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
BCKDHBP21953 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.96■■□□□ 1.27
BCKDHBP21953 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
BCKDHBP21953 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms