Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SPDYE3A6NKU9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SPDYE3A6NKU9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.42■■□□□ 1.82
SPDYE3A6NKU9 AC131212.1-201ENST00000613771 668 ntBASIC26.42■■□□□ 1.82
SPDYE3A6NKU9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.42■■□□□ 1.82
SPDYE3A6NKU9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SPDYE3A6NKU9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SPDYE3A6NKU9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SPDYE3A6NKU9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SPDYE3A6NKU9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SPDYE3A6NKU9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 HLA-L-211ENST00000482052 1765 ntBASIC26.4■■□□□ 1.82
SPDYE3A6NKU9 AC138932.3-201ENST00000567634 1902 ntBASIC26.39■■□□□ 1.82
SPDYE3A6NKU9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.39■■□□□ 1.82
SPDYE3A6NKU9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SPDYE3A6NKU9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.39■■□□□ 1.82
SPDYE3A6NKU9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SPDYE3A6NKU9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SPDYE3A6NKU9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.39■■□□□ 1.81
SPDYE3A6NKU9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SPDYE3A6NKU9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPDYE3A6NKU9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPDYE3A6NKU9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SPDYE3A6NKU9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPDYE3A6NKU9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SPDYE3A6NKU9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 AC004448.1-201ENST00000458332 883 ntBASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPDYE3A6NKU9 AC131274.2-201ENST00000580697 1507 ntBASIC26.36■■□□□ 1.81
SPDYE3A6NKU9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.36■■□□□ 1.81
SPDYE3A6NKU9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.36■■□□□ 1.81
SPDYE3A6NKU9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
SPDYE3A6NKU9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPDYE3A6NKU9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 MIR6722-201ENST00000617286 78 ntBASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 AL022069.1-201ENST00000568025 1636 ntBASIC26.34■■□□□ 1.81
SPDYE3A6NKU9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 MIR6724-1-201ENST00000616420 92 ntBASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 MIR6724-2-201ENST00000616483 92 ntBASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 MIR6724-4-201ENST00000617390 92 ntBASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 MIR6724-3-201ENST00000622482 92 ntBASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SPDYE3A6NKU9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPDYE3A6NKU9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPDYE3A6NKU9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.32■■□□□ 1.8
SPDYE3A6NKU9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPDYE3A6NKU9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPDYE3A6NKU9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
SPDYE3A6NKU9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE3A6NKU9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.3■■□□□ 1.8
SPDYE3A6NKU9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.3■■□□□ 1.8
SPDYE3A6NKU9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE3A6NKU9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPDYE3A6NKU9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms