Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBAL3A6NHL2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBAL3A6NHL2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBAL3A6NHL2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBAL3A6NHL2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBAL3A6NHL2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBAL3A6NHL2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.64■□□□□ 0.89
TUBAL3A6NHL2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.64■□□□□ 0.89
TUBAL3A6NHL2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBAL3A6NHL2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBAL3A6NHL2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBAL3A6NHL2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBAL3A6NHL2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.63■□□□□ 0.89
TUBAL3A6NHL2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBAL3A6NHL2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 ERN1-208ENST00000606895 2068 ntBASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 AC068473.5-201ENST00000616428 2072 ntBASIC20.62■□□□□ 0.89
TUBAL3A6NHL2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MIR935-201ENST00000401179 91 ntBASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 AC131281.2-201ENST00000520478 145 ntBASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MIR6724-1-201ENST00000616420 92 ntBASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MIR6724-2-201ENST00000616483 92 ntBASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MIR6724-4-201ENST00000617390 92 ntBASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 MIR6724-3-201ENST00000622482 92 ntBASIC20.61■□□□□ 0.89
TUBAL3A6NHL2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 AL136116.3-201ENST00000402907 1138 ntBASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 AL356740.2-201ENST00000601559 647 ntBASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBAL3A6NHL2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 AL139246.5-201ENST00000606645 996 ntBASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 AL117332.1-201ENST00000622628 974 ntBASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.59■□□□□ 0.89
TUBAL3A6NHL2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBAL3A6NHL2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBAL3A6NHL2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TUBAL3A6NHL2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TUBAL3A6NHL2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.58■□□□□ 0.88
TUBAL3A6NHL2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TUBAL3A6NHL2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBAL3A6NHL2 MIR638-201ENST00000385237 100 ntBASIC20.57■□□□□ 0.88
TUBAL3A6NHL2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBAL3A6NHL2 MIR3621-201ENST00000580529 85 ntBASIC20.57■□□□□ 0.88
TUBAL3A6NHL2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.57■□□□□ 0.88
TUBAL3A6NHL2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBAL3A6NHL2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBAL3A6NHL2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBAL3A6NHL2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBAL3A6NHL2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBAL3A6NHL2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBAL3A6NHL2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBAL3A6NHL2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms