Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV6-7A0A0A0MS04 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TRBV6-7A0A0A0MS04 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV6-7A0A0A0MS04 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-7A0A0A0MS04 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.33■□□□□ 0.68
TRBV6-7A0A0A0MS04 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-7A0A0A0MS04 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TRBV6-7A0A0A0MS04 ABCB10P4-201ENST00000566803 2184 ntBASIC19.33■□□□□ 0.68
TRBV6-7A0A0A0MS04 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-7A0A0A0MS04 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 GPX1-201ENST00000419349 1106 ntBASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV6-7A0A0A0MS04 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 MIR4449-201ENST00000578365 66 ntBASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRBV6-7A0A0A0MS04 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-7A0A0A0MS04 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 LINC00565-201ENST00000562710 2331 ntBASIC19.29■□□□□ 0.68
TRBV6-7A0A0A0MS04 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRBV6-7A0A0A0MS04 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV6-7A0A0A0MS04 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.27■□□□□ 0.67
TRBV6-7A0A0A0MS04 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV6-7A0A0A0MS04 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-7A0A0A0MS04 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 AC009831.1-201ENST00000580420 1582 ntBASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV6-7A0A0A0MS04 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 EP400NL-214ENST00000641289 2402 ntBASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms