Protein–RNA interactions for Protein: Q9UK45

LSM7, U6 snRNA-associated Sm-like protein LSm7, humanhuman

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7Q9UK45 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LSM7Q9UK45 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LSM7Q9UK45 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LSM7Q9UK45 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.04■■□□□ 1.44
LSM7Q9UK45 AL356740.2-201ENST00000601559 647 ntBASIC24.04■■□□□ 1.44
LSM7Q9UK45 AL117332.1-201ENST00000622628 974 ntBASIC24.04■■□□□ 1.44
LSM7Q9UK45 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
LSM7Q9UK45 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.03■■□□□ 1.44
LSM7Q9UK45 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LSM7Q9UK45 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LSM7Q9UK45 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.03■■□□□ 1.44
LSM7Q9UK45 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.03■■□□□ 1.44
LSM7Q9UK45 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LSM7Q9UK45 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LSM7Q9UK45 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LSM7Q9UK45 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
LSM7Q9UK45 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.02■■□□□ 1.44
LSM7Q9UK45 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.02■■□□□ 1.44
LSM7Q9UK45 MIR6722-201ENST00000617286 78 ntBASIC24.02■■□□□ 1.44
LSM7Q9UK45 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.02■■□□□ 1.44
LSM7Q9UK45 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
LSM7Q9UK45 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LSM7Q9UK45 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LSM7Q9UK45 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LSM7Q9UK45 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.01■■□□□ 1.43
LSM7Q9UK45 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSM7Q9UK45 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSM7Q9UK45 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LSM7Q9UK45 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSM7Q9UK45 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
LSM7Q9UK45 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.01■■□□□ 1.43
LSM7Q9UK45 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.01■■□□□ 1.43
LSM7Q9UK45 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.01■■□□□ 1.43
LSM7Q9UK45 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSM7Q9UK45 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSM7Q9UK45 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24■■□□□ 1.43
LSM7Q9UK45 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24■■□□□ 1.43
LSM7Q9UK45 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24■■□□□ 1.43
LSM7Q9UK45 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
LSM7Q9UK45 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24■■□□□ 1.43
LSM7Q9UK45 MIR3621-201ENST00000580529 85 ntBASIC24■■□□□ 1.43
LSM7Q9UK45 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
LSM7Q9UK45 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LSM7Q9UK45 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24■■□□□ 1.43
LSM7Q9UK45 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24■■□□□ 1.43
LSM7Q9UK45 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.99■■□□□ 1.43
LSM7Q9UK45 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.99■■□□□ 1.43
LSM7Q9UK45 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LSM7Q9UK45 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LSM7Q9UK45 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LSM7Q9UK45 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.99■■□□□ 1.43
LSM7Q9UK45 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LSM7Q9UK45 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LSM7Q9UK45 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LSM7Q9UK45 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
LSM7Q9UK45 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.99■■□□□ 1.43
LSM7Q9UK45 AC004448.1-201ENST00000458332 883 ntBASIC23.98■■□□□ 1.43
LSM7Q9UK45 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.98■■□□□ 1.43
LSM7Q9UK45 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.98■■□□□ 1.43
LSM7Q9UK45 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.98■■□□□ 1.43
LSM7Q9UK45 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LSM7Q9UK45 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LSM7Q9UK45 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.97■■□□□ 1.43
LSM7Q9UK45 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.97■■□□□ 1.43
LSM7Q9UK45 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LSM7Q9UK45 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.97■■□□□ 1.43
LSM7Q9UK45 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.97■■□□□ 1.43
LSM7Q9UK45 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LSM7Q9UK45 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
LSM7Q9UK45 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LSM7Q9UK45 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LSM7Q9UK45 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.95■■□□□ 1.42
LSM7Q9UK45 AC131281.2-201ENST00000520478 145 ntBASIC23.95■■□□□ 1.42
LSM7Q9UK45 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSM7Q9UK45 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.95■■□□□ 1.42
LSM7Q9UK45 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.95■■□□□ 1.42
LSM7Q9UK45 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.94■■□□□ 1.42
LSM7Q9UK45 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.94■■□□□ 1.42
LSM7Q9UK45 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
LSM7Q9UK45 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSM7Q9UK45 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSM7Q9UK45 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LSM7Q9UK45 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.93■■□□□ 1.42
LSM7Q9UK45 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.93■■□□□ 1.42
LSM7Q9UK45 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LSM7Q9UK45 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSM7Q9UK45 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.92■■□□□ 1.42
LSM7Q9UK45 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms