Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.6■■■□□ 2.17
RTFDC1Q9BY42 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
RTFDC1Q9BY42 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.6■■■□□ 2.17
RTFDC1Q9BY42 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RTFDC1Q9BY42 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
RTFDC1Q9BY42 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
RTFDC1Q9BY42 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.59■■■□□ 2.17
RTFDC1Q9BY42 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
RTFDC1Q9BY42 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RTFDC1Q9BY42 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RTFDC1Q9BY42 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
RTFDC1Q9BY42 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
RTFDC1Q9BY42 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 AC096887.2-201ENST00000623443 1957 ntBASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 AC097639.1-201ENST00000565519 1891 ntBASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTFDC1Q9BY42 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 MIR5787-201ENST00000611784 55 ntBASIC28.56■■■□□ 2.16
RTFDC1Q9BY42 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
RTFDC1Q9BY42 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.55■■■□□ 2.16
RTFDC1Q9BY42 MIR939-201ENST00000401314 82 ntBASIC28.55■■■□□ 2.16
RTFDC1Q9BY42 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RTFDC1Q9BY42 AC105265.2-201ENST00000467189 838 ntBASIC28.55■■■□□ 2.16
RTFDC1Q9BY42 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.55■■■□□ 2.16
RTFDC1Q9BY42 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTFDC1Q9BY42 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
RTFDC1Q9BY42 AF213884.3-201ENST00000563833 479 ntBASIC28.54■■■□□ 2.16
RTFDC1Q9BY42 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.54■■■□□ 2.16
RTFDC1Q9BY42 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 DUX4L19-201ENST00000557448 1267 ntBASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 AC104564.3-201ENST00000582367 638 ntBASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
RTFDC1Q9BY42 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTFDC1Q9BY42 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.52■■■□□ 2.16
RTFDC1Q9BY42 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.52■■■□□ 2.16
RTFDC1Q9BY42 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.52■■■□□ 2.16
RTFDC1Q9BY42 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RTFDC1Q9BY42 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.16
RTFDC1Q9BY42 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
RTFDC1Q9BY42 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.51■■■□□ 2.16
RTFDC1Q9BY42 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.51■■■□□ 2.15
RTFDC1Q9BY42 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
RTFDC1Q9BY42 AP001330.3-201ENST00000520123 633 ntBASIC28.51■■■□□ 2.15
RTFDC1Q9BY42 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RTFDC1Q9BY42 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RTFDC1Q9BY42 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RTFDC1Q9BY42 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RTFDC1Q9BY42 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.5■■■□□ 2.15
RTFDC1Q9BY42 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RTFDC1Q9BY42 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RTFDC1Q9BY42 ERN1-208ENST00000606895 2068 ntBASIC28.49■■■□□ 2.15
RTFDC1Q9BY42 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RTFDC1Q9BY42 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.49■■■□□ 2.15
RTFDC1Q9BY42 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.49■■■□□ 2.15
RTFDC1Q9BY42 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RTFDC1Q9BY42 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RTFDC1Q9BY42 AC005703.6-201ENST00000623265 1329 ntBASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RTFDC1Q9BY42 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RTFDC1Q9BY42 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms