Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC026271.2-201ENST00000428091 497 ntBASIC23.24■■□□□ 1.31
TMEFF1Q8IYR6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.24■■□□□ 1.31
TMEFF1Q8IYR6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TMEFF1Q8IYR6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEFF1Q8IYR6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEFF1Q8IYR6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEFF1Q8IYR6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEFF1Q8IYR6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEFF1Q8IYR6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 AL355001.2-201ENST00000620617 1191 ntBASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.22■■□□□ 1.31
TMEFF1Q8IYR6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 EDA-201ENST00000338901 1233 ntBASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEFF1Q8IYR6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
TMEFF1Q8IYR6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
TMEFF1Q8IYR6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
TMEFF1Q8IYR6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEFF1Q8IYR6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEFF1Q8IYR6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TMEFF1Q8IYR6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TMEFF1Q8IYR6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.18■■□□□ 1.3
TMEFF1Q8IYR6 AC097639.1-201ENST00000565519 1891 ntBASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 AC105265.2-201ENST00000467189 838 ntBASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 ERN1-208ENST00000606895 2068 ntBASIC23.17■■□□□ 1.3
TMEFF1Q8IYR6 AC096887.2-201ENST00000623443 1957 ntBASIC23.16■■□□□ 1.3
TMEFF1Q8IYR6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEFF1Q8IYR6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEFF1Q8IYR6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEFF1Q8IYR6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEFF1Q8IYR6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEFF1Q8IYR6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 MIR5787-201ENST00000611784 55 ntBASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.15■■□□□ 1.3
TMEFF1Q8IYR6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TMEFF1Q8IYR6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.14■■□□□ 1.3
TMEFF1Q8IYR6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
TMEFF1Q8IYR6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
TMEFF1Q8IYR6 AF213884.3-201ENST00000563833 479 ntBASIC23.14■■□□□ 1.29
TMEFF1Q8IYR6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TMEFF1Q8IYR6 AL136967.2-201ENST00000623968 743 ntBASIC23.14■■□□□ 1.29
TMEFF1Q8IYR6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.14■■□□□ 1.29
TMEFF1Q8IYR6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 AC004448.1-201ENST00000458332 883 ntBASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TMEFF1Q8IYR6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 AC104564.3-201ENST00000582367 638 ntBASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TMEFF1Q8IYR6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
TMEFF1Q8IYR6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TMEFF1Q8IYR6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms