Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRK2Q5S007 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRK2Q5S007 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRK2Q5S007 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRRK2Q5S007 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRK2Q5S007 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRK2Q5S007 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRK2Q5S007 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRK2Q5S007 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.56■□□□□ 0.88
LRRK2Q5S007 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRK2Q5S007 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRK2Q5S007 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LRRK2Q5S007 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRK2Q5S007 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRK2Q5S007 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRK2Q5S007 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRK2Q5S007 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LRRK2Q5S007 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRK2Q5S007 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.55■□□□□ 0.88
LRRK2Q5S007 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRK2Q5S007 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRK2Q5S007 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRK2Q5S007 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRK2Q5S007 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
LRRK2Q5S007 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
LRRK2Q5S007 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRK2Q5S007 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRK2Q5S007 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRK2Q5S007 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.52■□□□□ 0.88
LRRK2Q5S007 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 AC136469.2-201ENST00000623944 1028 ntBASIC20.52■□□□□ 0.88
LRRK2Q5S007 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRK2Q5S007 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRK2Q5S007 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.52■□□□□ 0.87
LRRK2Q5S007 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRK2Q5S007 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRK2Q5S007 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRK2Q5S007 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRK2Q5S007 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRK2Q5S007 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRK2Q5S007 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRK2Q5S007 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRK2Q5S007 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRK2Q5S007 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRK2Q5S007 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRK2Q5S007 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRK2Q5S007 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LRRK2Q5S007 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRK2Q5S007 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRK2Q5S007 AC027612.3-201ENST00000413684 1047 ntBASIC20.49■□□□□ 0.87
LRRK2Q5S007 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LRRK2Q5S007 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRK2Q5S007 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRK2Q5S007 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRK2Q5S007 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRRK2Q5S007 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRK2Q5S007 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRK2Q5S007 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRK2Q5S007 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRK2Q5S007 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRK2Q5S007 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LRRK2Q5S007 AL358852.1-201ENST00000623174 1268 ntBASIC20.48■□□□□ 0.87
LRRK2Q5S007 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LRRK2Q5S007 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRK2Q5S007 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRK2Q5S007 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRK2Q5S007 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRK2Q5S007 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRK2Q5S007 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.47■□□□□ 0.87
LRRK2Q5S007 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.47■□□□□ 0.87
LRRK2Q5S007 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRK2Q5S007 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRK2Q5S007 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRK2Q5S007 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRK2Q5S007 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRK2Q5S007 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRK2Q5S007 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRK2Q5S007 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRK2Q5S007 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms