Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RXRBP28702 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
RXRBP28702 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RXRBP28702 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC31.25■■■□□ 2.59
RXRBP28702 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.25■■■□□ 2.59
RXRBP28702 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.25■■■□□ 2.59
RXRBP28702 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.25■■■□□ 2.59
RXRBP28702 AC245100.8-202ENST00000629247 1058 ntBASIC31.25■■■□□ 2.59
RXRBP28702 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC31.25■■■□□ 2.59
RXRBP28702 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
RXRBP28702 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RXRBP28702 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RXRBP28702 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RXRBP28702 NME4-202ENST00000382940 766 ntTSL 3 BASIC31.24■■■□□ 2.59
RXRBP28702 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.24■■■□□ 2.59
RXRBP28702 AC123595.1-201ENST00000440769 1046 ntBASIC31.24■■■□□ 2.59
RXRBP28702 NME4-211ENST00000620944 1193 ntTSL 2 BASIC31.24■■■□□ 2.59
RXRBP28702 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
RXRBP28702 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.24■■■□□ 2.59
RXRBP28702 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
RXRBP28702 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RXRBP28702 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RXRBP28702 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RXRBP28702 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.23■■■□□ 2.59
RXRBP28702 NTF6G-201ENST00000591094 616 ntBASIC31.23■■■□□ 2.59
RXRBP28702 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
RXRBP28702 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RXRBP28702 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC31.22■■■□□ 2.59
RXRBP28702 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.22■■■□□ 2.59
RXRBP28702 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RXRBP28702 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.21■■■□□ 2.59
RXRBP28702 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.21■■■□□ 2.59
RXRBP28702 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RXRBP28702 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RXRBP28702 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RXRBP28702 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.2■■■□□ 2.59
RXRBP28702 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.2■■■□□ 2.59
RXRBP28702 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
RXRBP28702 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RXRBP28702 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
RXRBP28702 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.2■■■□□ 2.58
RXRBP28702 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.19■■■□□ 2.58
RXRBP28702 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.19■■■□□ 2.58
RXRBP28702 BX842568.3-201ENST00000418104 571 ntBASIC31.19■■■□□ 2.58
RXRBP28702 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.19■■■□□ 2.58
RXRBP28702 AC136469.2-201ENST00000623944 1028 ntBASIC31.19■■■□□ 2.58
RXRBP28702 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RXRBP28702 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RXRBP28702 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
RXRBP28702 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RXRBP28702 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC31.18■■■□□ 2.58
RXRBP28702 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.18■■■□□ 2.58
RXRBP28702 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.17■■■□□ 2.58
RXRBP28702 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RXRBP28702 AC080038.1-201ENST00000611274 1154 ntBASIC31.17■■■□□ 2.58
RXRBP28702 AC005703.6-201ENST00000623265 1329 ntBASIC31.17■■■□□ 2.58
RXRBP28702 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RXRBP28702 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.17■■■□□ 2.58
RXRBP28702 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RXRBP28702 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.16■■■□□ 2.58
RXRBP28702 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
RXRBP28702 AC027612.3-201ENST00000413684 1047 ntBASIC31.16■■■□□ 2.58
RXRBP28702 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.16■■■□□ 2.58
RXRBP28702 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.16■■■□□ 2.58
RXRBP28702 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.16■■■□□ 2.58
RXRBP28702 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC31.16■■■□□ 2.58
RXRBP28702 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RXRBP28702 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
RXRBP28702 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.15■■■□□ 2.58
RXRBP28702 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.15■■■□□ 2.58
RXRBP28702 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.15■■■□□ 2.58
RXRBP28702 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.15■■■□□ 2.58
RXRBP28702 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.15■■■□□ 2.58
RXRBP28702 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
RXRBP28702 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RXRBP28702 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RXRBP28702 AC104771.1-201ENST00000603335 964 ntBASIC31.14■■■□□ 2.58
RXRBP28702 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.14■■■□□ 2.58
RXRBP28702 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RXRBP28702 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RXRBP28702 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RXRBP28702 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RXRBP28702 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
RXRBP28702 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.13■■■□□ 2.57
RXRBP28702 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RXRBP28702 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RXRBP28702 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.12■■■□□ 2.57
RXRBP28702 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.12■■■□□ 2.57
RXRBP28702 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.12■■■□□ 2.57
RXRBP28702 BX255925.1-201ENST00000566954 1854 ntBASIC31.12■■■□□ 2.57
RXRBP28702 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31.11■■■□□ 2.57
RXRBP28702 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
RXRBP28702 CCDC92B-201ENST00000575506 885 ntBASIC31.11■■■□□ 2.57
RXRBP28702 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.1■■■□□ 2.57
RXRBP28702 AL449106.1-201ENST00000608517 1980 ntBASIC31.1■■■□□ 2.57
RXRBP28702 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.1■■■□□ 2.57
RXRBP28702 RAP2CP1-201ENST00000605103 478 ntBASIC31.1■■■□□ 2.57
RXRBP28702 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.09■■■□□ 2.57
RXRBP28702 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RXRBP28702 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms