Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTSDP07339 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSDP07339 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSDP07339 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CTSDP07339 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSDP07339 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSDP07339 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSDP07339 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSDP07339 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CTSDP07339 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSDP07339 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.24■□□□□ 0.67
CTSDP07339 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSDP07339 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSDP07339 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTSDP07339 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTSDP07339 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.23■□□□□ 0.67
CTSDP07339 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSDP07339 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSDP07339 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSDP07339 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
CTSDP07339 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSDP07339 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSDP07339 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSDP07339 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSDP07339 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSDP07339 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSDP07339 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSDP07339 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSDP07339 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSDP07339 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CTSDP07339 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSDP07339 AL157400.5-201ENST00000507624 621 ntBASIC19.21■□□□□ 0.67
CTSDP07339 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSDP07339 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSDP07339 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSDP07339 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSDP07339 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTSDP07339 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSDP07339 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSDP07339 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.2■□□□□ 0.66
CTSDP07339 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.2■□□□□ 0.66
CTSDP07339 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSDP07339 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSDP07339 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSDP07339 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.2■□□□□ 0.66
CTSDP07339 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSDP07339 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CTSDP07339 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.19■□□□□ 0.66
CTSDP07339 MIR7108-201ENST00000614319 87 ntBASIC19.19■□□□□ 0.66
CTSDP07339 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSDP07339 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CTSDP07339 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSDP07339 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSDP07339 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSDP07339 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSDP07339 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTSDP07339 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.18■□□□□ 0.66
CTSDP07339 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSDP07339 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 AC233723.2-201ENST00000623798 2106 ntBASIC19.17■□□□□ 0.66
CTSDP07339 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSDP07339 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTSDP07339 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CTSDP07339 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms