Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TPM3P06753 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TPM3P06753 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.91■■□□□ 1.74
TPM3P06753 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TPM3P06753 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TPM3P06753 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.91■■□□□ 1.74
TPM3P06753 ZNRF2P2-203ENST00000454624 420 ntBASIC25.91■■□□□ 1.74
TPM3P06753 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
TPM3P06753 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.91■■□□□ 1.74
TPM3P06753 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.91■■□□□ 1.74
TPM3P06753 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TPM3P06753 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TPM3P06753 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TPM3P06753 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.9■■□□□ 1.74
TPM3P06753 MIR6089-201ENST00000616698 64 ntBASIC25.9■■□□□ 1.74
TPM3P06753 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TPM3P06753 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.9■■□□□ 1.74
TPM3P06753 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.9■■□□□ 1.74
TPM3P06753 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TPM3P06753 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
TPM3P06753 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TPM3P06753 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.89■■□□□ 1.74
TPM3P06753 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.89■■□□□ 1.74
TPM3P06753 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.89■■□□□ 1.74
TPM3P06753 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.89■■□□□ 1.73
TPM3P06753 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TPM3P06753 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TPM3P06753 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
TPM3P06753 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
TPM3P06753 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TPM3P06753 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
TPM3P06753 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.88■■□□□ 1.73
TPM3P06753 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TPM3P06753 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.88■■□□□ 1.73
TPM3P06753 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC25.87■■□□□ 1.73
TPM3P06753 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TPM3P06753 CR559946.2-201ENST00000623684 991 ntBASIC25.87■■□□□ 1.73
TPM3P06753 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TPM3P06753 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TPM3P06753 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TPM3P06753 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
TPM3P06753 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TPM3P06753 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TPM3P06753 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TPM3P06753 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TPM3P06753 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
TPM3P06753 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.85■■□□□ 1.73
TPM3P06753 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TPM3P06753 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
TPM3P06753 MIR3960-201ENST00000583311 91 ntBASIC25.85■■□□□ 1.73
TPM3P06753 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TPM3P06753 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TPM3P06753 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TPM3P06753 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.85■■□□□ 1.73
TPM3P06753 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TPM3P06753 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TPM3P06753 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 AC233723.2-201ENST00000623798 2106 ntBASIC25.84■■□□□ 1.73
TPM3P06753 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TPM3P06753 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.84■■□□□ 1.73
TPM3P06753 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TPM3P06753 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TPM3P06753 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
TPM3P06753 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
TPM3P06753 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TPM3P06753 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TPM3P06753 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TPM3P06753 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.83■■□□□ 1.72
TPM3P06753 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
TPM3P06753 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
TPM3P06753 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.82■■□□□ 1.72
TPM3P06753 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TPM3P06753 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
TPM3P06753 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.82■■□□□ 1.72
TPM3P06753 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TPM3P06753 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TPM3P06753 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.82■■□□□ 1.72
TPM3P06753 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
TPM3P06753 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
TPM3P06753 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TPM3P06753 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TPM3P06753 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TPM3P06753 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.81■■□□□ 1.72
TPM3P06753 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
TPM3P06753 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TPM3P06753 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
TPM3P06753 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
TPM3P06753 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TPM3P06753 LINC00565-201ENST00000562710 2331 ntBASIC25.81■■□□□ 1.72
TPM3P06753 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.81■■□□□ 1.72
TPM3P06753 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TPM3P06753 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.8■■□□□ 1.72
TPM3P06753 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TPM3P06753 AC025884.2-201ENST00000553429 711 ntBASIC25.8■■□□□ 1.72
TPM3P06753 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms