Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.38■■□□□ 1.01
CEACAM4O75871 AC024257.2-201ENST00000549699 147 ntBASIC21.38■■□□□ 1.01
CEACAM4O75871 AL355001.2-201ENST00000620617 1191 ntBASIC21.38■■□□□ 1.01
CEACAM4O75871 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.38■■□□□ 1.01
CEACAM4O75871 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CEACAM4O75871 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CEACAM4O75871 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CEACAM4O75871 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CEACAM4O75871 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CEACAM4O75871 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.37■■□□□ 1.01
CEACAM4O75871 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.37■■□□□ 1.01
CEACAM4O75871 AC010501.1-201ENST00000606270 1962 ntBASIC21.37■■□□□ 1.01
CEACAM4O75871 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CEACAM4O75871 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CEACAM4O75871 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CEACAM4O75871 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CEACAM4O75871 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.36■■□□□ 1.01
CEACAM4O75871 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CEACAM4O75871 AC005703.6-201ENST00000623265 1329 ntBASIC21.35■■□□□ 1.01
CEACAM4O75871 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CEACAM4O75871 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.35■■□□□ 1.01
CEACAM4O75871 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CEACAM4O75871 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CEACAM4O75871 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CEACAM4O75871 AC026271.2-201ENST00000428091 497 ntBASIC21.35■■□□□ 1.01
CEACAM4O75871 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CEACAM4O75871 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CEACAM4O75871 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CEACAM4O75871 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CEACAM4O75871 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.34■■□□□ 1.01
CEACAM4O75871 DUX4L19-201ENST00000557448 1267 ntBASIC21.34■■□□□ 1.01
CEACAM4O75871 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CEACAM4O75871 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CEACAM4O75871 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CEACAM4O75871 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.33■■□□□ 1.01
CEACAM4O75871 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
CEACAM4O75871 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CEACAM4O75871 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
CEACAM4O75871 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.33■■□□□ 1.01
CEACAM4O75871 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.33■■□□□ 1.01
CEACAM4O75871 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.33■■□□□ 1
CEACAM4O75871 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CEACAM4O75871 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CEACAM4O75871 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CEACAM4O75871 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CEACAM4O75871 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.32■■□□□ 1
CEACAM4O75871 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CEACAM4O75871 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CEACAM4O75871 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CEACAM4O75871 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.32■■□□□ 1
CEACAM4O75871 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.32■■□□□ 1
CEACAM4O75871 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CEACAM4O75871 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.32■■□□□ 1
CEACAM4O75871 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.32■■□□□ 1
CEACAM4O75871 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CEACAM4O75871 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.32■■□□□ 1
CEACAM4O75871 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CEACAM4O75871 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
CEACAM4O75871 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.31■■□□□ 1
CEACAM4O75871 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CEACAM4O75871 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.31■■□□□ 1
CEACAM4O75871 AL136967.2-201ENST00000623968 743 ntBASIC21.31■■□□□ 1
CEACAM4O75871 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.31■■□□□ 1
CEACAM4O75871 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.3■■□□□ 1
CEACAM4O75871 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.3■■□□□ 1
CEACAM4O75871 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.3■■□□□ 1
CEACAM4O75871 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.3■■□□□ 1
CEACAM4O75871 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
CEACAM4O75871 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.29■■□□□ 1
CEACAM4O75871 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CEACAM4O75871 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.29■■□□□ 1
CEACAM4O75871 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CEACAM4O75871 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CEACAM4O75871 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.28■■□□□ 1
CEACAM4O75871 MIR939-201ENST00000401314 82 ntBASIC21.28■■□□□ 1
CEACAM4O75871 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CEACAM4O75871 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.28■■□□□ 1
CEACAM4O75871 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.28■■□□□ 1
CEACAM4O75871 AC092171.4-201ENST00000609130 632 ntBASIC21.28■■□□□ 1
CEACAM4O75871 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CEACAM4O75871 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.28■■□□□ 1
CEACAM4O75871 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CEACAM4O75871 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CEACAM4O75871 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CEACAM4O75871 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CEACAM4O75871 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms