Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNRNP200O75643 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.37■■□□□ 1.17
SNRNP200O75643 UNC93B8-201ENST00000511903 705 ntBASIC22.37■■□□□ 1.17
SNRNP200O75643 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.37■■□□□ 1.17
SNRNP200O75643 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNRNP200O75643 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SNRNP200O75643 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SNRNP200O75643 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.36■■□□□ 1.17
SNRNP200O75643 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.36■■□□□ 1.17
SNRNP200O75643 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.36■■□□□ 1.17
SNRNP200O75643 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNRNP200O75643 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SNRNP200O75643 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNRNP200O75643 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SNRNP200O75643 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
SNRNP200O75643 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SNRNP200O75643 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.35■■□□□ 1.17
SNRNP200O75643 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SNRNP200O75643 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNRNP200O75643 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.35■■□□□ 1.17
SNRNP200O75643 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SNRNP200O75643 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SNRNP200O75643 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
SNRNP200O75643 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.34■■□□□ 1.17
SNRNP200O75643 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.34■■□□□ 1.17
SNRNP200O75643 AC131274.2-201ENST00000580697 1507 ntBASIC22.34■■□□□ 1.17
SNRNP200O75643 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNRNP200O75643 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNRNP200O75643 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.34■■□□□ 1.17
SNRNP200O75643 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.34■■□□□ 1.17
SNRNP200O75643 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SNRNP200O75643 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SNRNP200O75643 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.34■■□□□ 1.17
SNRNP200O75643 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SNRNP200O75643 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNRNP200O75643 KRT16P3-201ENST00000439127 1283 ntBASIC22.33■■□□□ 1.17
SNRNP200O75643 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNRNP200O75643 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SNRNP200O75643 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SNRNP200O75643 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.33■■□□□ 1.16
SNRNP200O75643 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.33■■□□□ 1.16
SNRNP200O75643 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.33■■□□□ 1.16
SNRNP200O75643 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.32■■□□□ 1.16
SNRNP200O75643 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.32■■□□□ 1.16
SNRNP200O75643 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.32■■□□□ 1.16
SNRNP200O75643 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNRNP200O75643 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNRNP200O75643 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.31■■□□□ 1.16
SNRNP200O75643 AC092028.1-203ENST00000608262 953 ntBASIC22.31■■□□□ 1.16
SNRNP200O75643 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.31■■□□□ 1.16
SNRNP200O75643 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNRNP200O75643 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNRNP200O75643 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.31■■□□□ 1.16
SNRNP200O75643 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNRNP200O75643 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.31■■□□□ 1.16
SNRNP200O75643 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNRNP200O75643 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
SNRNP200O75643 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.3■■□□□ 1.16
SNRNP200O75643 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SNRNP200O75643 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.3■■□□□ 1.16
SNRNP200O75643 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNRNP200O75643 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP200O75643 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.29■■□□□ 1.16
SNRNP200O75643 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.29■■□□□ 1.16
SNRNP200O75643 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.29■■□□□ 1.16
SNRNP200O75643 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP200O75643 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SNRNP200O75643 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.29■■□□□ 1.16
SNRNP200O75643 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.29■■□□□ 1.16
SNRNP200O75643 AC131212.1-201ENST00000613771 668 ntBASIC22.29■■□□□ 1.16
SNRNP200O75643 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP200O75643 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNRNP200O75643 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP200O75643 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP200O75643 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP200O75643 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SNRNP200O75643 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SNRNP200O75643 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.28■■□□□ 1.16
SNRNP200O75643 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.28■■□□□ 1.16
SNRNP200O75643 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP200O75643 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SNRNP200O75643 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP200O75643 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNRNP200O75643 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.27■■□□□ 1.16
SNRNP200O75643 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP200O75643 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.27■■□□□ 1.16
SNRNP200O75643 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNRNP200O75643 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SNRNP200O75643 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SNRNP200O75643 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms