Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.21■□□□□ 0.35
SNAI2O43623 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SNAI2O43623 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SNAI2O43623 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAI2O43623 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SNAI2O43623 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.21■□□□□ 0.34
SNAI2O43623 AC004812.2-201ENST00000611079 2094 ntBASIC17.2■□□□□ 0.34
SNAI2O43623 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.2■□□□□ 0.34
SNAI2O43623 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAI2O43623 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.2■□□□□ 0.34
SNAI2O43623 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAI2O43623 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.19■□□□□ 0.34
SNAI2O43623 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.19■□□□□ 0.34
SNAI2O43623 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SNAI2O43623 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.19■□□□□ 0.34
SNAI2O43623 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNAI2O43623 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SNAI2O43623 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.19■□□□□ 0.34
SNAI2O43623 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNAI2O43623 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAI2O43623 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAI2O43623 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SNAI2O43623 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAI2O43623 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAI2O43623 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.18■□□□□ 0.34
SNAI2O43623 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNAI2O43623 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNAI2O43623 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAI2O43623 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNAI2O43623 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
SNAI2O43623 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAI2O43623 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAI2O43623 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.17■□□□□ 0.34
SNAI2O43623 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNAI2O43623 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNAI2O43623 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAI2O43623 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAI2O43623 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.16■□□□□ 0.34
SNAI2O43623 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAI2O43623 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAI2O43623 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SNAI2O43623 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAI2O43623 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAI2O43623 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAI2O43623 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAI2O43623 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAI2O43623 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAI2O43623 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNAI2O43623 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAI2O43623 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.15■□□□□ 0.34
SNAI2O43623 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAI2O43623 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAI2O43623 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAI2O43623 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAI2O43623 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAI2O43623 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAI2O43623 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAI2O43623 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.14■□□□□ 0.33
SNAI2O43623 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.14■□□□□ 0.33
SNAI2O43623 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNAI2O43623 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SNAI2O43623 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 AL024507.2-201ENST00000606070 2574 ntBASIC17.14■□□□□ 0.33
SNAI2O43623 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAI2O43623 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAI2O43623 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SNAI2O43623 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms