Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AC087393.1-201ENST00000582896 145 ntBASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AL161729.1-201ENST00000604104 1402 ntBASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-6A0A0A6YYG2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
TRBV6-6A0A0A6YYG2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV6-6A0A0A6YYG2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV6-6A0A0A6YYG2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TRBV6-6A0A0A6YYG2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AL592295.1-201ENST00000400984 884 ntBASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AL592293.1-201ENST00000502889 1188 ntBASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV6-6A0A0A6YYG2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AC068473.5-201ENST00000616428 2072 ntBASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.28■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV6-6A0A0A6YYG2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV6-6A0A0A6YYG2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV6-6A0A0A6YYG2 SPCS2P3-201ENST00000500401 656 ntBASIC19.27■□□□□ 0.68
TRBV6-6A0A0A6YYG2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV6-6A0A0A6YYG2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV6-6A0A0A6YYG2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV6-6A0A0A6YYG2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MIR6765-201ENST00000614092 87 ntBASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-6A0A0A6YYG2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-6A0A0A6YYG2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-6A0A0A6YYG2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms