Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3EA0A087X179 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D3EA0A087X179 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 MIR6722-201ENST00000617286 78 ntBASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
TBC1D3EA0A087X179 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3EA0A087X179 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3EA0A087X179 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D3EA0A087X179 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.23■■□□□ 1.31
TBC1D3EA0A087X179 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 DUSP8P4-201ENST00000399538 1761 ntBASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.22■■□□□ 1.31
TBC1D3EA0A087X179 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 MIR4466-201ENST00000606121 54 ntBASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.21■■□□□ 1.31
TBC1D3EA0A087X179 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 SLC6A10P-202ENST00000431994 2058 ntBASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TBC1D3EA0A087X179 AC091060.1-201ENST00000623524 1766 ntBASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 AL139246.5-201ENST00000606645 996 ntBASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TBC1D3EA0A087X179 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3EA0A087X179 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.18■■□□□ 1.3
TBC1D3EA0A087X179 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3EA0A087X179 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TBC1D3EA0A087X179 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 AC145676.1-201ENST00000514988 2004 ntBASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TBC1D3EA0A087X179 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 AL512631.2-201ENST00000604634 923 ntBASIC23.16■■□□□ 1.3
TBC1D3EA0A087X179 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 MIR638-201ENST00000385237 100 ntBASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 AC004448.1-201ENST00000458332 883 ntBASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TBC1D3EA0A087X179 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.14■■□□□ 1.3
TBC1D3EA0A087X179 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.14■■□□□ 1.3
TBC1D3EA0A087X179 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TBC1D3EA0A087X179 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TBC1D3EA0A087X179 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TBC1D3EA0A087X179 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.14■■□□□ 1.29
TBC1D3EA0A087X179 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.14■■□□□ 1.29
TBC1D3EA0A087X179 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D3EA0A087X179 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
TBC1D3EA0A087X179 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
TBC1D3EA0A087X179 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TBC1D3EA0A087X179 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.13■■□□□ 1.29
TBC1D3EA0A087X179 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TBC1D3EA0A087X179 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms