Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH20Q9HBT6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.33■□□□□ 0.84
CDH20Q9HBT6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.84
CDH20Q9HBT6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH20Q9HBT6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 AC011551.1-201ENST00000614101 683 ntBASIC20.32■□□□□ 0.84
CDH20Q9HBT6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 AC022211.4-201ENST00000625094 2161 ntBASIC20.32■□□□□ 0.84
CDH20Q9HBT6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH20Q9HBT6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CDH20Q9HBT6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 KRT18P24-201ENST00000344739 1156 ntBASIC20.3■□□□□ 0.84
CDH20Q9HBT6 AC120024.1-201ENST00000562672 995 ntBASIC20.3■□□□□ 0.84
CDH20Q9HBT6 AC103724.3-201ENST00000564481 992 ntBASIC20.3■□□□□ 0.84
CDH20Q9HBT6 AL031848.2-201ENST00000607670 837 ntBASIC20.3■□□□□ 0.84
CDH20Q9HBT6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 AC090877.2-201ENST00000558441 1738 ntBASIC20.3■□□□□ 0.84
CDH20Q9HBT6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH20Q9HBT6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 AC142381.3-201ENST00000568208 1670 ntBASIC20.29■□□□□ 0.84
CDH20Q9HBT6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 MIR6089-201ENST00000616698 64 ntBASIC20.29■□□□□ 0.84
CDH20Q9HBT6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH20Q9HBT6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH20Q9HBT6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH20Q9HBT6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH20Q9HBT6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH20Q9HBT6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH20Q9HBT6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.25■□□□□ 0.83
CDH20Q9HBT6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH20Q9HBT6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 AP003733.4-201ENST00000623785 1697 ntBASIC20.24■□□□□ 0.83
CDH20Q9HBT6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH20Q9HBT6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH20Q9HBT6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH20Q9HBT6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH20Q9HBT6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms