Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALMS1Q8TCU4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALMS1Q8TCU4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ALMS1Q8TCU4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.02■□□□□ 0.16
ALMS1Q8TCU4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
ALMS1Q8TCU4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.02■□□□□ 0.15
ALMS1Q8TCU4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ALMS1Q8TCU4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.02■□□□□ 0.15
ALMS1Q8TCU4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.02■□□□□ 0.15
ALMS1Q8TCU4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ALMS1Q8TCU4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 ID1-201ENST00000376105 1233 ntBASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 KRT18P5-201ENST00000436075 1291 ntBASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 SLC47A1P1-202ENST00000449666 945 ntBASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.01■□□□□ 0.15
ALMS1Q8TCU4 LINC01003-201ENST00000564834 1764 ntBASIC16■□□□□ 0.15
ALMS1Q8TCU4 YBX1P1-201ENST00000445822 960 ntBASIC16■□□□□ 0.15
ALMS1Q8TCU4 DRD5P2-201ENST00000421395 2012 ntBASIC16■□□□□ 0.15
ALMS1Q8TCU4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
ALMS1Q8TCU4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
ALMS1Q8TCU4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 AC006455.2-201ENST00000429931 906 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 AC004448.1-201ENST00000458332 883 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L2-201ENST00000561772 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L6-201ENST00000626483 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L1-201ENST00000627662 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L8-201ENST00000629013 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L3-201ENST00000630187 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L7-201ENST00000630678 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 DUX4L5-201ENST00000630834 1275 ntBASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALMS1Q8TCU4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 FOXO3B-201ENST00000395675 1928 ntBASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 AL138724.1-201ENST00000606771 1088 ntBASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms