Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
LINC01006Q8NI28 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01006Q8NI28 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01006Q8NI28 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01006Q8NI28 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01006Q8NI28 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC01006Q8NI28 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.34■□□□□ 0.53
LINC01006Q8NI28 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LINC01006Q8NI28 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01006Q8NI28 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01006Q8NI28 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01006Q8NI28 PBX2P1-201ENST00000493219 1291 ntBASIC18.33■□□□□ 0.52
LINC01006Q8NI28 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.33■□□□□ 0.52
LINC01006Q8NI28 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.33■□□□□ 0.52
LINC01006Q8NI28 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
LINC01006Q8NI28 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
LINC01006Q8NI28 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01006Q8NI28 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01006Q8NI28 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.33■□□□□ 0.52
LINC01006Q8NI28 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC01006Q8NI28 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
LINC01006Q8NI28 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC01006Q8NI28 AC106739.1-201ENST00000617035 715 ntBASIC18.32■□□□□ 0.52
LINC01006Q8NI28 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01006Q8NI28 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01006Q8NI28 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
LINC01006Q8NI28 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC01006Q8NI28 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC01006Q8NI28 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 UNC93B3-201ENST00000308076 687 ntBASIC18.29■□□□□ 0.52
LINC01006Q8NI28 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LINC01006Q8NI28 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 AC010501.1-201ENST00000606270 1962 ntBASIC18.28■□□□□ 0.52
LINC01006Q8NI28 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01006Q8NI28 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 SRD5A1P1-201ENST00000442297 786 ntBASIC18.27■□□□□ 0.52
LINC01006Q8NI28 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01006Q8NI28 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01006Q8NI28 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 AC004448.1-201ENST00000458332 883 ntBASIC18.26■□□□□ 0.51
LINC01006Q8NI28 AC142381.2-201ENST00000566120 298 ntBASIC18.26■□□□□ 0.51
LINC01006Q8NI28 AL136162.1-201ENST00000607711 1078 ntBASIC18.26■□□□□ 0.51
LINC01006Q8NI28 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LINC01006Q8NI28 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LINC01006Q8NI28 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01006Q8NI28 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01006Q8NI28 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms