Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.15■■□□□ 1.78
SWSAP1Q6NVH7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.14■■□□□ 1.78
SWSAP1Q6NVH7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SWSAP1Q6NVH7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.14■■□□□ 1.78
SWSAP1Q6NVH7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SWSAP1Q6NVH7 KRT16P3-201ENST00000439127 1283 ntBASIC26.14■■□□□ 1.78
SWSAP1Q6NVH7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SWSAP1Q6NVH7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.14■■□□□ 1.77
SWSAP1Q6NVH7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SWSAP1Q6NVH7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
SWSAP1Q6NVH7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.13■■□□□ 1.77
SWSAP1Q6NVH7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SWSAP1Q6NVH7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SWSAP1Q6NVH7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.12■■□□□ 1.77
SWSAP1Q6NVH7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.11■■□□□ 1.77
SWSAP1Q6NVH7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SWSAP1Q6NVH7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SWSAP1Q6NVH7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SWSAP1Q6NVH7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.11■■□□□ 1.77
SWSAP1Q6NVH7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SWSAP1Q6NVH7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.09■■□□□ 1.77
SWSAP1Q6NVH7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
SWSAP1Q6NVH7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
SWSAP1Q6NVH7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SWSAP1Q6NVH7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SWSAP1Q6NVH7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SWSAP1Q6NVH7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.07■■□□□ 1.76
SWSAP1Q6NVH7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.07■■□□□ 1.76
SWSAP1Q6NVH7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.07■■□□□ 1.76
SWSAP1Q6NVH7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 AC010997.5-201ENST00000609182 354 ntBASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SWSAP1Q6NVH7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SWSAP1Q6NVH7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SWSAP1Q6NVH7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.05■■□□□ 1.76
SWSAP1Q6NVH7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.05■■□□□ 1.76
SWSAP1Q6NVH7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.05■■□□□ 1.76
SWSAP1Q6NVH7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 MTDHP2-201ENST00000601468 714 ntBASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SWSAP1Q6NVH7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SWSAP1Q6NVH7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SWSAP1Q6NVH7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SWSAP1Q6NVH7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SWSAP1Q6NVH7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SWSAP1Q6NVH7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SWSAP1Q6NVH7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 MIR6089-201ENST00000616698 64 ntBASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms