Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A12P48065 AC139795.1-202ENST00000500444 432 ntBASIC22.64■■□□□ 1.21
SLC6A12P48065 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A12P48065 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.64■■□□□ 1.21
SLC6A12P48065 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A12P48065 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.64■■□□□ 1.21
SLC6A12P48065 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A12P48065 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SLC6A12P48065 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A12P48065 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A12P48065 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A12P48065 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A12P48065 TSPY13P-201ENST00000338964 914 ntBASIC22.63■■□□□ 1.21
SLC6A12P48065 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.63■■□□□ 1.21
SLC6A12P48065 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A12P48065 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
SLC6A12P48065 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A12P48065 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A12P48065 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A12P48065 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SLC6A12P48065 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A12P48065 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.62■■□□□ 1.21
SLC6A12P48065 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A12P48065 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.62■■□□□ 1.21
SLC6A12P48065 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC6A12P48065 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A12P48065 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A12P48065 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A12P48065 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A12P48065 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC6A12P48065 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
SLC6A12P48065 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A12P48065 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SLC6A12P48065 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A12P48065 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A12P48065 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A12P48065 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A12P48065 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SLC6A12P48065 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A12P48065 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC6A12P48065 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A12P48065 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A12P48065 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A12P48065 AC012354.3-201ENST00000623734 483 ntBASIC22.59■■□□□ 1.21
SLC6A12P48065 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A12P48065 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SLC6A12P48065 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A12P48065 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A12P48065 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC6A12P48065 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A12P48065 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A12P48065 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A12P48065 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC6A12P48065 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A12P48065 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A12P48065 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A12P48065 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC6A12P48065 PVT1_1.1-201ENST00000615125 194 ntBASIC22.57■■□□□ 1.2
SLC6A12P48065 AC074183.2-201ENST00000623112 922 ntBASIC22.57■■□□□ 1.2
SLC6A12P48065 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.57■■□□□ 1.2
SLC6A12P48065 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A12P48065 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A12P48065 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A12P48065 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A12P48065 AC022616.5-201ENST00000518796 181 ntBASIC22.56■■□□□ 1.2
SLC6A12P48065 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A12P48065 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.56■■□□□ 1.2
SLC6A12P48065 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A12P48065 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A12P48065 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
SLC6A12P48065 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC6A12P48065 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SLC6A12P48065 BHLHE23-202ENST00000612929 1109 ntBASIC22.55■■□□□ 1.2
SLC6A12P48065 AC011551.1-201ENST00000614101 683 ntBASIC22.55■■□□□ 1.2
SLC6A12P48065 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC6A12P48065 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC6A12P48065 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A12P48065 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A12P48065 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A12P48065 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A12P48065 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A12P48065 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.54■■□□□ 1.2
SLC6A12P48065 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC6A12P48065 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A12P48065 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC6A12P48065 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC6A12P48065 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC6A12P48065 AL033527.3-201ENST00000566366 1196 ntBASIC22.53■■□□□ 1.2
SLC6A12P48065 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A12P48065 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A12P48065 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC6A12P48065 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A12P48065 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A12P48065 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms