Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.41■■□□□ 1.66
TRIM49CP0CI26 LINC01124-201ENST00000409786 2117 ntBASIC25.41■■□□□ 1.66
TRIM49CP0CI26 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.41■■□□□ 1.66
TRIM49CP0CI26 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM49CP0CI26 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM49CP0CI26 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.4■■□□□ 1.66
TRIM49CP0CI26 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM49CP0CI26 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.4■■□□□ 1.66
TRIM49CP0CI26 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM49CP0CI26 AC019171.1-201ENST00000601251 1056 ntBASIC25.4■■□□□ 1.66
TRIM49CP0CI26 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM49CP0CI26 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM49CP0CI26 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM49CP0CI26 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM49CP0CI26 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.39■■□□□ 1.65
TRIM49CP0CI26 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.39■■□□□ 1.65
TRIM49CP0CI26 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM49CP0CI26 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM49CP0CI26 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 HLA-L-211ENST00000482052 1765 ntBASIC25.38■■□□□ 1.65
TRIM49CP0CI26 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.38■■□□□ 1.65
TRIM49CP0CI26 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM49CP0CI26 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 AC090877.2-201ENST00000558441 1738 ntBASIC25.36■■□□□ 1.65
TRIM49CP0CI26 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM49CP0CI26 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 AC074183.2-201ENST00000623112 922 ntBASIC25.35■■□□□ 1.65
TRIM49CP0CI26 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM49CP0CI26 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TRIM49CP0CI26 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM49CP0CI26 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.34■■□□□ 1.65
TRIM49CP0CI26 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.33■■□□□ 1.65
TRIM49CP0CI26 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM49CP0CI26 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM49CP0CI26 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM49CP0CI26 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM49CP0CI26 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM49CP0CI26 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM49CP0CI26 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.31■■□□□ 1.64
TRIM49CP0CI26 KRT8P33-201ENST00000508125 1423 ntBASIC25.31■■□□□ 1.64
TRIM49CP0CI26 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.31■■□□□ 1.64
TRIM49CP0CI26 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.31■■□□□ 1.64
TRIM49CP0CI26 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM49CP0CI26 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
TRIM49CP0CI26 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM49CP0CI26 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.3■■□□□ 1.64
TRIM49CP0CI26 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM49CP0CI26 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM49CP0CI26 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49CP0CI26 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49CP0CI26 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM49CP0CI26 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM49CP0CI26 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.28■■□□□ 1.64
TRIM49CP0CI26 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
TRIM49CP0CI26 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms