Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CD3DP04234 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD3DP04234 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD3DP04234 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CD3DP04234 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD3DP04234 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.75■□□□□ 0.75
CD3DP04234 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CD3DP04234 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CD3DP04234 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CD3DP04234 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD3DP04234 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CD3DP04234 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD3DP04234 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.75■□□□□ 0.75
CD3DP04234 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD3DP04234 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD3DP04234 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CD3DP04234 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L13-201ENST00000554103 1267 ntBASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L15-201ENST00000611059 1267 ntBASIC19.74■□□□□ 0.75
CD3DP04234 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L23-201ENST00000615195 1269 ntBASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L24-201ENST00000617576 1269 ntBASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L22-201ENST00000618238 1269 ntBASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L20-201ENST00000619712 1269 ntBASIC19.74■□□□□ 0.75
CD3DP04234 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L21-201ENST00000622058 1269 ntBASIC19.74■□□□□ 0.75
CD3DP04234 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L10-201ENST00000622460 1267 ntBASIC19.74■□□□□ 0.75
CD3DP04234 DUX4L25-201ENST00000624915 1269 ntBASIC19.74■□□□□ 0.75
CD3DP04234 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD3DP04234 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.74■□□□□ 0.75
CD3DP04234 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD3DP04234 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.73■□□□□ 0.75
CD3DP04234 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CD3DP04234 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.73■□□□□ 0.75
CD3DP04234 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CD3DP04234 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD3DP04234 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.73■□□□□ 0.75
CD3DP04234 HLA-L-211ENST00000482052 1765 ntBASIC19.72■□□□□ 0.75
CD3DP04234 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD3DP04234 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CD3DP04234 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD3DP04234 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD3DP04234 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.72■□□□□ 0.75
CD3DP04234 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.71■□□□□ 0.75
CD3DP04234 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 HLA-V-202ENST00000446817 847 ntBASIC19.71■□□□□ 0.75
CD3DP04234 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.71■□□□□ 0.75
CD3DP04234 LINC01971-201ENST00000617888 1048 ntBASIC19.71■□□□□ 0.75
CD3DP04234 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD3DP04234 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.71■□□□□ 0.75
CD3DP04234 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
CD3DP04234 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CD3DP04234 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.7■□□□□ 0.74
CD3DP04234 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.7■□□□□ 0.74
CD3DP04234 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.7■□□□□ 0.74
CD3DP04234 AC233723.2-201ENST00000623798 2106 ntBASIC19.7■□□□□ 0.74
CD3DP04234 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 EP400NL-214ENST00000641289 2402 ntBASIC19.7■□□□□ 0.74
CD3DP04234 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD3DP04234 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD3DP04234 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.69■□□□□ 0.74
CD3DP04234 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD3DP04234 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.69■□□□□ 0.74
CD3DP04234 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.69■□□□□ 0.74
CD3DP04234 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD3DP04234 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD3DP04234 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD3DP04234 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD3DP04234 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.69■□□□□ 0.74
CD3DP04234 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CD3DP04234 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.68■□□□□ 0.74
CD3DP04234 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD3DP04234 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms