Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 AC011551.1-201ENST00000614101 683 ntBASIC19.59■□□□□ 0.73
NKX6-3A6NJ46 MIR6089-201ENST00000616698 64 ntBASIC19.59■□□□□ 0.73
NKX6-3A6NJ46 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-3A6NJ46 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKX6-3A6NJ46 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NKX6-3A6NJ46 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKX6-3A6NJ46 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKX6-3A6NJ46 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-3A6NJ46 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.57■□□□□ 0.72
NKX6-3A6NJ46 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-3A6NJ46 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX6-3A6NJ46 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-3A6NJ46 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-3A6NJ46 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 THA1P-201ENST00000590384 1145 ntBASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-3A6NJ46 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-3A6NJ46 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 AC090877.2-201ENST00000558441 1738 ntBASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 AP003733.4-201ENST00000623785 1697 ntBASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-3A6NJ46 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX6-3A6NJ46 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-3A6NJ46 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-3A6NJ46 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NKX6-3A6NJ46 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
NKX6-3A6NJ46 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-3A6NJ46 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.52■□□□□ 0.72
NKX6-3A6NJ46 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX6-3A6NJ46 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX6-3A6NJ46 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
NKX6-3A6NJ46 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NKX6-3A6NJ46 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 AC103834.1-201ENST00000520383 144 ntBASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 AC120024.1-201ENST00000562672 995 ntBASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX6-3A6NJ46 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 KRT18P24-201ENST00000344739 1156 ntBASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 AL031848.2-201ENST00000607670 837 ntBASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-3A6NJ46 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-3A6NJ46 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-3A6NJ46 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX6-3A6NJ46 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms