Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AC097639.1-201ENST00000565519 1891 ntBASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV4S1A1TA0A5B7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AP003733.4-201ENST00000623785 1697 ntBASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TCRBV4S1A1TA0A5B7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV4S1A1TA0A5B7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV4S1A1TA0A5B7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV4S1A1TA0A5B7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV4S1A1TA0A5B7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV4S1A1TA0A5B7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TCRBV4S1A1TA0A5B7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TCRBV4S1A1TA0A5B7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 AC022616.5-201ENST00000518796 181 ntBASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV4S1A1TA0A5B7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV4S1A1TA0A5B7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 LINC01124-201ENST00000409786 2117 ntBASIC18.61■□□□□ 0.57
TCRBV4S1A1TA0A5B7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 SLC6A10P-202ENST00000431994 2058 ntBASIC18.6■□□□□ 0.57
TCRBV4S1A1TA0A5B7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms