Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
BRD9Q9H8M2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BRD9Q9H8M2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
BRD9Q9H8M2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BRD9Q9H8M2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.4■■□□□ 1.5
BRD9Q9H8M2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.4■■□□□ 1.5
BRD9Q9H8M2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
BRD9Q9H8M2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
BRD9Q9H8M2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.39■■□□□ 1.5
BRD9Q9H8M2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.39■■□□□ 1.5
BRD9Q9H8M2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRD9Q9H8M2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRD9Q9H8M2 AC096631.2-201ENST00000436136 790 ntBASIC24.39■■□□□ 1.49
BRD9Q9H8M2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
BRD9Q9H8M2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.39■■□□□ 1.49
BRD9Q9H8M2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.39■■□□□ 1.49
BRD9Q9H8M2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.39■■□□□ 1.49
BRD9Q9H8M2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
BRD9Q9H8M2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 MIR4466-201ENST00000606121 54 ntBASIC24.38■■□□□ 1.49
BRD9Q9H8M2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
BRD9Q9H8M2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD9Q9H8M2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.37■■□□□ 1.49
BRD9Q9H8M2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BRD9Q9H8M2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.37■■□□□ 1.49
BRD9Q9H8M2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.36■■□□□ 1.49
BRD9Q9H8M2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD9Q9H8M2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BRD9Q9H8M2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BRD9Q9H8M2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD9Q9H8M2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.35■■□□□ 1.49
BRD9Q9H8M2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BRD9Q9H8M2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
BRD9Q9H8M2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.35■■□□□ 1.49
BRD9Q9H8M2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD9Q9H8M2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
BRD9Q9H8M2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD9Q9H8M2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
BRD9Q9H8M2 AC005837.3-201ENST00000612163 286 ntBASIC24.34■■□□□ 1.49
BRD9Q9H8M2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD9Q9H8M2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BRD9Q9H8M2 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.33■■□□□ 1.49
BRD9Q9H8M2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.33■■□□□ 1.49
BRD9Q9H8M2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
BRD9Q9H8M2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
BRD9Q9H8M2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.32■■□□□ 1.48
BRD9Q9H8M2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
BRD9Q9H8M2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BRD9Q9H8M2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.32■■□□□ 1.48
BRD9Q9H8M2 AF131216.4-201ENST00000638924 1588 ntBASIC24.32■■□□□ 1.48
BRD9Q9H8M2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.31■■□□□ 1.48
BRD9Q9H8M2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
BRD9Q9H8M2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.3■■□□□ 1.48
BRD9Q9H8M2 AL512631.2-201ENST00000604634 923 ntBASIC24.3■■□□□ 1.48
BRD9Q9H8M2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD9Q9H8M2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
BRD9Q9H8M2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.3■■□□□ 1.48
BRD9Q9H8M2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD9Q9H8M2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD9Q9H8M2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.29■■□□□ 1.48
BRD9Q9H8M2 FOXO3B-201ENST00000395675 1928 ntBASIC24.29■■□□□ 1.48
BRD9Q9H8M2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD9Q9H8M2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD9Q9H8M2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD9Q9H8M2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.27■■□□□ 1.48
BRD9Q9H8M2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD9Q9H8M2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.27■■□□□ 1.48
BRD9Q9H8M2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.27■■□□□ 1.48
BRD9Q9H8M2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
BRD9Q9H8M2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
BRD9Q9H8M2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD9Q9H8M2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.25■■□□□ 1.47
BRD9Q9H8M2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.25■■□□□ 1.47
BRD9Q9H8M2 AC133561.4-201ENST00000566112 224 ntBASIC24.25■■□□□ 1.47
BRD9Q9H8M2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.25■■□□□ 1.47
BRD9Q9H8M2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.25■■□□□ 1.47
BRD9Q9H8M2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD9Q9H8M2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms