Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.7■□□□□ 0.1
LITAFQ99732 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC15.7■□□□□ 0.1
LITAFQ99732 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LITAFQ99732 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LITAFQ99732 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.7■□□□□ 0.1
LITAFQ99732 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LITAFQ99732 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.69■□□□□ 0.1
LITAFQ99732 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LITAFQ99732 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC15.69■□□□□ 0.1
LITAFQ99732 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC15.69■□□□□ 0.1
LITAFQ99732 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LITAFQ99732 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LITAFQ99732 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LITAFQ99732 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
LITAFQ99732 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LITAFQ99732 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LITAFQ99732 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LITAFQ99732 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LITAFQ99732 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LITAFQ99732 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC15.68■□□□□ 0.1
LITAFQ99732 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.68■□□□□ 0.1
LITAFQ99732 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LITAFQ99732 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.68■□□□□ 0.1
LITAFQ99732 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.68■□□□□ 0.1
LITAFQ99732 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.68■□□□□ 0.1
LITAFQ99732 AC137767.1-201ENST00000602918 1920 ntBASIC15.67■□□□□ 0.1
LITAFQ99732 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LITAFQ99732 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LITAFQ99732 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
LITAFQ99732 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.67■□□□□ 0.1
LITAFQ99732 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LITAFQ99732 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LITAFQ99732 LINC00526-201ENST00000581067 1875 ntBASIC15.67■□□□□ 0.1
LITAFQ99732 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LITAFQ99732 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.66■□□□□ 0.1
LITAFQ99732 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LITAFQ99732 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LITAFQ99732 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LITAFQ99732 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.66■□□□□ 0.1
LITAFQ99732 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
LITAFQ99732 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LITAFQ99732 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LITAFQ99732 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.65■□□□□ 0.1
LITAFQ99732 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 MIR6089-201ENST00000616698 64 ntBASIC15.65■□□□□ 0.1
LITAFQ99732 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 C1orf229-201ENST00000623686 2258 ntBASIC15.65■□□□□ 0.1
LITAFQ99732 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.65■□□□□ 0.1
LITAFQ99732 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LITAFQ99732 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LITAFQ99732 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LITAFQ99732 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LITAFQ99732 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LITAFQ99732 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LITAFQ99732 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LITAFQ99732 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC15.64■□□□□ 0.09
LITAFQ99732 AC127496.7-201ENST00000625110 1798 ntBASIC15.64■□□□□ 0.09
LITAFQ99732 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LITAFQ99732 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LITAFQ99732 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LITAFQ99732 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
LITAFQ99732 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC15.63■□□□□ 0.09
LITAFQ99732 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC15.63■□□□□ 0.09
LITAFQ99732 AC136428.2-201ENST00000563187 214 ntBASIC15.63■□□□□ 0.09
LITAFQ99732 AC005559.1-201ENST00000589661 871 ntBASIC15.63■□□□□ 0.09
LITAFQ99732 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.63■□□□□ 0.09
LITAFQ99732 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LITAFQ99732 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.63■□□□□ 0.09
LITAFQ99732 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LITAFQ99732 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.63■□□□□ 0.09
LITAFQ99732 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms