Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.53■■□□□ 1.68
GBF1Q92538 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.53■■□□□ 1.68
GBF1Q92538 AF213884.3-201ENST00000563833 479 ntBASIC25.53■■□□□ 1.68
GBF1Q92538 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
GBF1Q92538 AC142472.1-201ENST00000612013 1741 ntBASIC25.53■■□□□ 1.68
GBF1Q92538 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.53■■□□□ 1.68
GBF1Q92538 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.53■■□□□ 1.68
GBF1Q92538 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GBF1Q92538 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.52■■□□□ 1.68
GBF1Q92538 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GBF1Q92538 AP001330.3-201ENST00000520123 633 ntBASIC25.52■■□□□ 1.68
GBF1Q92538 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.52■■□□□ 1.68
GBF1Q92538 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.52■■□□□ 1.68
GBF1Q92538 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
GBF1Q92538 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GBF1Q92538 AC087623.3-201ENST00000607047 1098 ntBASIC25.51■■□□□ 1.67
GBF1Q92538 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
GBF1Q92538 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
GBF1Q92538 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
GBF1Q92538 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.51■■□□□ 1.67
GBF1Q92538 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
GBF1Q92538 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
GBF1Q92538 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
GBF1Q92538 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
GBF1Q92538 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
GBF1Q92538 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
GBF1Q92538 LINC01003-201ENST00000564834 1764 ntBASIC25.5■■□□□ 1.67
GBF1Q92538 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
GBF1Q92538 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.49■■□□□ 1.67
GBF1Q92538 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.49■■□□□ 1.67
GBF1Q92538 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.49■■□□□ 1.67
GBF1Q92538 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
GBF1Q92538 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
GBF1Q92538 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
GBF1Q92538 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
GBF1Q92538 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
GBF1Q92538 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
GBF1Q92538 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.48■■□□□ 1.67
GBF1Q92538 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.48■■□□□ 1.67
GBF1Q92538 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
GBF1Q92538 AC097381.1-201ENST00000429019 1296 ntBASIC25.47■■□□□ 1.67
GBF1Q92538 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.47■■□□□ 1.67
GBF1Q92538 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
GBF1Q92538 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.47■■□□□ 1.67
GBF1Q92538 MIR6821-201ENST00000617625 74 ntBASIC25.47■■□□□ 1.67
GBF1Q92538 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
GBF1Q92538 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
GBF1Q92538 MIR939-201ENST00000401314 82 ntBASIC25.46■■□□□ 1.67
GBF1Q92538 AL162430.1-201ENST00000480705 870 ntBASIC25.46■■□□□ 1.67
GBF1Q92538 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.46■■□□□ 1.67
GBF1Q92538 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
GBF1Q92538 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
GBF1Q92538 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.46■■□□□ 1.67
GBF1Q92538 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
GBF1Q92538 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
GBF1Q92538 AC142086.6-201ENST00000621154 1765 ntBASIC25.45■■□□□ 1.67
GBF1Q92538 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.45■■□□□ 1.67
GBF1Q92538 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
GBF1Q92538 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.45■■□□□ 1.67
GBF1Q92538 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.45■■□□□ 1.67
GBF1Q92538 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
GBF1Q92538 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GBF1Q92538 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
GBF1Q92538 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.45■■□□□ 1.66
GBF1Q92538 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.45■■□□□ 1.66
GBF1Q92538 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
GBF1Q92538 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
GBF1Q92538 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.45■■□□□ 1.66
GBF1Q92538 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
GBF1Q92538 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
GBF1Q92538 AC090192.1-201ENST00000517740 490 ntBASIC25.44■■□□□ 1.66
GBF1Q92538 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.43■■□□□ 1.66
GBF1Q92538 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.43■■□□□ 1.66
GBF1Q92538 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
GBF1Q92538 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
GBF1Q92538 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
GBF1Q92538 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
GBF1Q92538 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
GBF1Q92538 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
GBF1Q92538 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.42■■□□□ 1.66
GBF1Q92538 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
GBF1Q92538 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
GBF1Q92538 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
GBF1Q92538 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
GBF1Q92538 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
GBF1Q92538 AL136967.2-201ENST00000623968 743 ntBASIC25.42■■□□□ 1.66
GBF1Q92538 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
GBF1Q92538 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
GBF1Q92538 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
GBF1Q92538 AL355001.2-201ENST00000620617 1191 ntBASIC25.41■■□□□ 1.66
GBF1Q92538 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
GBF1Q92538 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
GBF1Q92538 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
GBF1Q92538 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GBF1Q92538 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
GBF1Q92538 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GBF1Q92538 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.4■■□□□ 1.66
GBF1Q92538 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
GBF1Q92538 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
GBF1Q92538 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms