Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.76■■□□□ 1.39
PTCD2Q8WV60 KRT8P33-201ENST00000508125 1423 ntBASIC23.76■■□□□ 1.39
PTCD2Q8WV60 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD2Q8WV60 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PTCD2Q8WV60 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD2Q8WV60 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD2Q8WV60 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD2Q8WV60 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCD2Q8WV60 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCD2Q8WV60 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCD2Q8WV60 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.74■■□□□ 1.39
PTCD2Q8WV60 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD2Q8WV60 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 RPS2P7-201ENST00000447334 885 ntBASIC23.73■■□□□ 1.39
PTCD2Q8WV60 AC103834.1-201ENST00000520383 144 ntBASIC23.73■■□□□ 1.39
PTCD2Q8WV60 AC087393.1-201ENST00000582896 145 ntBASIC23.73■■□□□ 1.39
PTCD2Q8WV60 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.73■■□□□ 1.39
PTCD2Q8WV60 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.72■■□□□ 1.39
PTCD2Q8WV60 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.72■■□□□ 1.39
PTCD2Q8WV60 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.72■■□□□ 1.39
PTCD2Q8WV60 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD2Q8WV60 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD2Q8WV60 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD2Q8WV60 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PTCD2Q8WV60 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.7■■□□□ 1.39
PTCD2Q8WV60 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD2Q8WV60 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD2Q8WV60 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD2Q8WV60 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.7■■□□□ 1.38
PTCD2Q8WV60 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PTCD2Q8WV60 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD2Q8WV60 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 AC074183.2-201ENST00000623112 922 ntBASIC23.68■■□□□ 1.38
PTCD2Q8WV60 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 FOXO3B-201ENST00000395675 1928 ntBASIC23.68■■□□□ 1.38
PTCD2Q8WV60 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD2Q8WV60 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.67■■□□□ 1.38
PTCD2Q8WV60 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD2Q8WV60 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD2Q8WV60 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD2Q8WV60 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.66■■□□□ 1.38
PTCD2Q8WV60 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD2Q8WV60 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD2Q8WV60 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD2Q8WV60 LONRF2P2-201ENST00000439212 571 ntBASIC23.64■■□□□ 1.37
PTCD2Q8WV60 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD2Q8WV60 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms