Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LINC00471Q8N535 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LINC00471Q8N535 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LINC00471Q8N535 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LINC00471Q8N535 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LINC00471Q8N535 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LINC00471Q8N535 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.42■■□□□ 1.02
LINC00471Q8N535 AC092296.2-201ENST00000589470 999 ntBASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00471Q8N535 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.41■■□□□ 1.02
LINC00471Q8N535 AC004812.2-201ENST00000611079 2094 ntBASIC21.41■■□□□ 1.02
LINC00471Q8N535 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LINC00471Q8N535 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC00471Q8N535 RP9P-202ENST00000450133 1212 ntBASIC21.41■■□□□ 1.02
LINC00471Q8N535 ECEL1P2-201ENST00000461596 1295 ntBASIC21.41■■□□□ 1.02
LINC00471Q8N535 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LINC00471Q8N535 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.4■■□□□ 1.02
LINC00471Q8N535 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00471Q8N535 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.4■■□□□ 1.02
LINC00471Q8N535 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00471Q8N535 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00471Q8N535 DUSP8P5-201ENST00000422884 1815 ntBASIC21.4■■□□□ 1.02
LINC00471Q8N535 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00471Q8N535 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00471Q8N535 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.4■■□□□ 1.02
LINC00471Q8N535 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LINC00471Q8N535 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LINC00471Q8N535 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LINC00471Q8N535 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.39■■□□□ 1.01
LINC00471Q8N535 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.39■■□□□ 1.01
LINC00471Q8N535 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.39■■□□□ 1.01
LINC00471Q8N535 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC00471Q8N535 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC00471Q8N535 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LINC00471Q8N535 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.39■■□□□ 1.01
LINC00471Q8N535 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
LINC00471Q8N535 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC00471Q8N535 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00471Q8N535 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LINC00471Q8N535 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.38■■□□□ 1.01
LINC00471Q8N535 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.37■■□□□ 1.01
LINC00471Q8N535 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00471Q8N535 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00471Q8N535 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00471Q8N535 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
LINC00471Q8N535 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00471Q8N535 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LINC00471Q8N535 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC00471Q8N535 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC00471Q8N535 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC00471Q8N535 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC00471Q8N535 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.36■■□□□ 1.01
LINC00471Q8N535 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINC00471Q8N535 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LINC00471Q8N535 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.35■■□□□ 1.01
LINC00471Q8N535 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LINC00471Q8N535 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINC00471Q8N535 HLA-L-211ENST00000482052 1765 ntBASIC21.35■■□□□ 1.01
LINC00471Q8N535 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LINC00471Q8N535 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
LINC00471Q8N535 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC00471Q8N535 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LINC00471Q8N535 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC00471Q8N535 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.34■■□□□ 1.01
LINC00471Q8N535 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC00471Q8N535 AC068473.5-201ENST00000616428 2072 ntBASIC21.34■■□□□ 1.01
LINC00471Q8N535 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LINC00471Q8N535 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
LINC00471Q8N535 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LINC00471Q8N535 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LINC00471Q8N535 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LINC00471Q8N535 AC093536.1-201ENST00000569153 554 ntBASIC21.33■■□□□ 1.01
LINC00471Q8N535 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.33■■□□□ 1.01
LINC00471Q8N535 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.33■■□□□ 1
LINC00471Q8N535 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LINC00471Q8N535 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
LINC00471Q8N535 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
LINC00471Q8N535 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.32■■□□□ 1
LINC00471Q8N535 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.32■■□□□ 1
LINC00471Q8N535 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.32■■□□□ 1
LINC00471Q8N535 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.32■■□□□ 1
LINC00471Q8N535 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms