Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR4767-201ENST00000582827 78 ntBASIC14.9□□□□□ -0.02
HSPG2P98160 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.9□□□□□ -0.02
HSPG2P98160 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC14.9□□□□□ -0.02
HSPG2P98160 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HSPG2P98160 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.9□□□□□ -0.02
HSPG2P98160 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HSPG2P98160 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
HSPG2P98160 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HSPG2P98160 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.89□□□□□ -0.03
HSPG2P98160 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HSPG2P98160 AL137784.2-201ENST00000607332 1000 ntBASIC14.89□□□□□ -0.03
HSPG2P98160 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.89□□□□□ -0.03
HSPG2P98160 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HSPG2P98160 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HSPG2P98160 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HSPG2P98160 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HSPG2P98160 AL449106.1-201ENST00000608517 1980 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 KRT18P10-201ENST00000388836 1287 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 KRT18P5-201ENST00000436075 1291 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 AC027682.1-201ENST00000562846 899 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 BX255925.1-201ENST00000566954 1854 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.88□□□□□ -0.03
HSPG2P98160 YBX1P1-201ENST00000445822 960 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L2-201ENST00000561772 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L6-201ENST00000626483 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L1-201ENST00000627662 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L8-201ENST00000629013 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L3-201ENST00000630187 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L7-201ENST00000630678 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 DUX4L5-201ENST00000630834 1275 ntBASIC14.88□□□□□ -0.03
HSPG2P98160 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HSPG2P98160 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.88□□□□□ -0.03
HSPG2P98160 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.87□□□□□ -0.03
HSPG2P98160 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.87□□□□□ -0.03
HSPG2P98160 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HSPG2P98160 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.87□□□□□ -0.03
HSPG2P98160 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HSPG2P98160 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HSPG2P98160 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HSPG2P98160 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HSPG2P98160 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HSPG2P98160 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HSPG2P98160 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
HSPG2P98160 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HSPG2P98160 SERBP1P1-201ENST00000396021 1160 ntBASIC14.86□□□□□ -0.03
HSPG2P98160 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HSPG2P98160 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HSPG2P98160 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HSPG2P98160 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HSPG2P98160 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HSPG2P98160 AC004911.1-201ENST00000416316 871 ntBASIC14.86□□□□□ -0.03
HSPG2P98160 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.86□□□□□ -0.03
HSPG2P98160 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HSPG2P98160 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.86□□□□□ -0.03
HSPG2P98160 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HSPG2P98160 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HSPG2P98160 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HSPG2P98160 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.85□□□□□ -0.03
HSPG2P98160 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.85□□□□□ -0.03
HSPG2P98160 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC14.85□□□□□ -0.03
HSPG2P98160 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HSPG2P98160 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HSPG2P98160 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
HSPG2P98160 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.85□□□□□ -0.03
HSPG2P98160 RAP2CP1-201ENST00000605103 478 ntBASIC14.84□□□□□ -0.03
HSPG2P98160 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.84□□□□□ -0.03
HSPG2P98160 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HSPG2P98160 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HSPG2P98160 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.84□□□□□ -0.03
HSPG2P98160 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HSPG2P98160 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
HSPG2P98160 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HSPG2P98160 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.83□□□□□ -0.04
HSPG2P98160 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HSPG2P98160 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC14.82□□□□□ -0.04
HSPG2P98160 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.82□□□□□ -0.04
HSPG2P98160 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.82□□□□□ -0.04
HSPG2P98160 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.82□□□□□ -0.04
HSPG2P98160 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.82□□□□□ -0.04
HSPG2P98160 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HSPG2P98160 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HSPG2P98160 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.82□□□□□ -0.04
HSPG2P98160 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HSPG2P98160 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HSPG2P98160 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.82□□□□□ -0.04
HSPG2P98160 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HSPG2P98160 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.81□□□□□ -0.04
HSPG2P98160 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HSPG2P98160 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC14.81□□□□□ -0.04
HSPG2P98160 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.81□□□□□ -0.04
HSPG2P98160 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms