Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CX3CL1P78423 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CX3CL1P78423 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CX3CL1P78423 SLC6A10P-202ENST00000431994 2058 ntBASIC18.79■□□□□ 0.6
CX3CL1P78423 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
CX3CL1P78423 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CX3CL1P78423 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.79■□□□□ 0.6
CX3CL1P78423 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CX3CL1P78423 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CX3CL1P78423 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CL1P78423 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CX3CL1P78423 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.78■□□□□ 0.6
CX3CL1P78423 AC012354.3-201ENST00000623734 483 ntBASIC18.78■□□□□ 0.6
CX3CL1P78423 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CL1P78423 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CL1P78423 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CL1P78423 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CX3CL1P78423 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CX3CL1P78423 TSPY13P-201ENST00000338964 914 ntBASIC18.77■□□□□ 0.6
CX3CL1P78423 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CX3CL1P78423 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CX3CL1P78423 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CX3CL1P78423 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CX3CL1P78423 AC022211.4-201ENST00000625094 2161 ntBASIC18.76■□□□□ 0.59
CX3CL1P78423 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
CX3CL1P78423 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CX3CL1P78423 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.76■□□□□ 0.59
CX3CL1P78423 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CX3CL1P78423 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CX3CL1P78423 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.75■□□□□ 0.59
CX3CL1P78423 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CX3CL1P78423 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CX3CL1P78423 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.75■□□□□ 0.59
CX3CL1P78423 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.75■□□□□ 0.59
CX3CL1P78423 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.75■□□□□ 0.59
CX3CL1P78423 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CX3CL1P78423 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CX3CL1P78423 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CX3CL1P78423 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.75■□□□□ 0.59
CX3CL1P78423 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CX3CL1P78423 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CX3CL1P78423 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 AC139795.1-202ENST00000500444 432 ntBASIC18.74■□□□□ 0.59
CX3CL1P78423 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CX3CL1P78423 FOXO3B-201ENST00000395675 1928 ntBASIC18.73■□□□□ 0.59
CX3CL1P78423 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.73■□□□□ 0.59
CX3CL1P78423 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.73■□□□□ 0.59
CX3CL1P78423 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CX3CL1P78423 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CX3CL1P78423 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CX3CL1P78423 AC142381.3-201ENST00000568208 1670 ntBASIC18.73■□□□□ 0.59
CX3CL1P78423 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.72■□□□□ 0.59
CX3CL1P78423 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CX3CL1P78423 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.72■□□□□ 0.59
CX3CL1P78423 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.72■□□□□ 0.59
CX3CL1P78423 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.72■□□□□ 0.59
CX3CL1P78423 BHLHE23-202ENST00000612929 1109 ntBASIC18.72■□□□□ 0.59
CX3CL1P78423 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CX3CL1P78423 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CX3CL1P78423 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CX3CL1P78423 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CX3CL1P78423 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.71■□□□□ 0.59
CX3CL1P78423 LONRF2P2-201ENST00000439212 571 ntBASIC18.71■□□□□ 0.59
CX3CL1P78423 AL033527.3-201ENST00000566366 1196 ntBASIC18.71■□□□□ 0.59
CX3CL1P78423 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.71■□□□□ 0.59
CX3CL1P78423 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.71■□□□□ 0.59
CX3CL1P78423 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CX3CL1P78423 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms