Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
APOC4P55056 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC4P55056 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC4P55056 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC4P55056 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.22■□□□□ 0.35
APOC4P55056 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.22■□□□□ 0.35
APOC4P55056 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOC4P55056 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOC4P55056 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOC4P55056 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APOC4P55056 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APOC4P55056 AC021242.3-201ENST00000607598 1377 ntBASIC17.21■□□□□ 0.35
APOC4P55056 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
APOC4P55056 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.21■□□□□ 0.35
APOC4P55056 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
APOC4P55056 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.21■□□□□ 0.35
APOC4P55056 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
APOC4P55056 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC4P55056 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC4P55056 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
APOC4P55056 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.21■□□□□ 0.34
APOC4P55056 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.2■□□□□ 0.34
APOC4P55056 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC4P55056 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC4P55056 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC4P55056 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 AC090877.2-201ENST00000558441 1738 ntBASIC17.19■□□□□ 0.34
APOC4P55056 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC4P55056 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 AL356441.2-201ENST00000443009 864 ntBASIC17.19■□□□□ 0.34
APOC4P55056 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.19■□□□□ 0.34
APOC4P55056 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 AC131212.1-201ENST00000613771 668 ntBASIC17.19■□□□□ 0.34
APOC4P55056 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC4P55056 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.19■□□□□ 0.34
APOC4P55056 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
APOC4P55056 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC4P55056 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC4P55056 DUSP8P4-201ENST00000399538 1761 ntBASIC17.18■□□□□ 0.34
APOC4P55056 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.18■□□□□ 0.34
APOC4P55056 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.18■□□□□ 0.34
APOC4P55056 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
APOC4P55056 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APOC4P55056 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
APOC4P55056 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOC4P55056 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOC4P55056 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOC4P55056 KRT16P3-201ENST00000439127 1283 ntBASIC17.17■□□□□ 0.34
APOC4P55056 TSPY9P-201ENST00000440215 945 ntBASIC17.17■□□□□ 0.34
APOC4P55056 TSPY11P-201ENST00000442607 1045 ntBASIC17.17■□□□□ 0.34
APOC4P55056 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.17■□□□□ 0.34
APOC4P55056 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.17■□□□□ 0.34
APOC4P55056 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.17■□□□□ 0.34
APOC4P55056 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.17■□□□□ 0.34
APOC4P55056 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.17■□□□□ 0.34
APOC4P55056 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
APOC4P55056 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APOC4P55056 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
APOC4P55056 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
APOC4P55056 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOC4P55056 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
APOC4P55056 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOC4P55056 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOC4P55056 AC145676.1-201ENST00000514988 2004 ntBASIC17.16■□□□□ 0.34
APOC4P55056 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOC4P55056 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.16■□□□□ 0.34
APOC4P55056 AC092028.1-203ENST00000608262 953 ntBASIC17.16■□□□□ 0.34
APOC4P55056 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APOC4P55056 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOC4P55056 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOC4P55056 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
APOC4P55056 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.15■□□□□ 0.34
APOC4P55056 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.15■□□□□ 0.34
APOC4P55056 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APOC4P55056 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.15■□□□□ 0.34
APOC4P55056 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
APOC4P55056 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
APOC4P55056 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APOC4P55056 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
APOC4P55056 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APOC4P55056 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
APOC4P55056 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APOC4P55056 MTDHP2-201ENST00000601468 714 ntBASIC17.14■□□□□ 0.33
APOC4P55056 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APOC4P55056 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms