Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.18■■■□□ 2.42
COL15A1P39059 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL15A1P39059 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
COL15A1P39059 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
COL15A1P39059 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL15A1P39059 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL15A1P39059 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.17■■■□□ 2.42
COL15A1P39059 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL15A1P39059 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL15A1P39059 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.16■■■□□ 2.42
COL15A1P39059 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL15A1P39059 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL15A1P39059 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.15■■■□□ 2.42
COL15A1P39059 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.15■■■□□ 2.42
COL15A1P39059 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
COL15A1P39059 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL15A1P39059 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.15■■■□□ 2.42
COL15A1P39059 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.15■■■□□ 2.42
COL15A1P39059 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL15A1P39059 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
COL15A1P39059 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
COL15A1P39059 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL15A1P39059 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
COL15A1P39059 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
COL15A1P39059 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.14■■■□□ 2.41
COL15A1P39059 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.41
COL15A1P39059 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL15A1P39059 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL15A1P39059 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL15A1P39059 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL15A1P39059 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL15A1P39059 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.13■■■□□ 2.41
COL15A1P39059 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.13■■■□□ 2.41
COL15A1P39059 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.13■■■□□ 2.41
COL15A1P39059 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL15A1P39059 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
COL15A1P39059 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL15A1P39059 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.12■■■□□ 2.41
COL15A1P39059 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL15A1P39059 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.11■■■□□ 2.41
COL15A1P39059 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
COL15A1P39059 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.11■■■□□ 2.41
COL15A1P39059 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL15A1P39059 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL15A1P39059 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.1■■■□□ 2.41
COL15A1P39059 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL15A1P39059 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.09■■■□□ 2.41
COL15A1P39059 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.09■■■□□ 2.41
COL15A1P39059 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.09■■■□□ 2.41
COL15A1P39059 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
COL15A1P39059 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL15A1P39059 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL15A1P39059 AC005837.3-201ENST00000612163 286 ntBASIC30.08■■■□□ 2.41
COL15A1P39059 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.07■■■□□ 2.4
COL15A1P39059 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL15A1P39059 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL15A1P39059 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.07■■■□□ 2.4
COL15A1P39059 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL15A1P39059 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL15A1P39059 FOXO3B-201ENST00000395675 1928 ntBASIC30.06■■■□□ 2.4
COL15A1P39059 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
COL15A1P39059 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.05■■■□□ 2.4
COL15A1P39059 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.05■■■□□ 2.4
COL15A1P39059 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL15A1P39059 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL15A1P39059 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.04■■■□□ 2.4
COL15A1P39059 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.04■■■□□ 2.4
COL15A1P39059 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL15A1P39059 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.04■■■□□ 2.4
COL15A1P39059 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.04■■■□□ 2.4
COL15A1P39059 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL15A1P39059 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL15A1P39059 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL15A1P39059 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.03■■■□□ 2.4
COL15A1P39059 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.03■■■□□ 2.4
COL15A1P39059 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
COL15A1P39059 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.03■■■□□ 2.4
COL15A1P39059 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL15A1P39059 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
COL15A1P39059 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL15A1P39059 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL15A1P39059 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL15A1P39059 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL15A1P39059 AC133561.4-201ENST00000566112 224 ntBASIC30.02■■■□□ 2.4
COL15A1P39059 SNX5-217ENST00000606557 1087 ntBASIC30.02■■■□□ 2.4
COL15A1P39059 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL15A1P39059 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL15A1P39059 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
COL15A1P39059 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.01■■■□□ 2.39
COL15A1P39059 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL15A1P39059 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.01■■■□□ 2.39
COL15A1P39059 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms