Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
ERCC1P07992 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC1P07992 AP003733.4-201ENST00000623785 1697 ntBASIC20.64■□□□□ 0.89
ERCC1P07992 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC1P07992 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ERCC1P07992 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC1P07992 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC1P07992 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC1P07992 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC1P07992 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC1P07992 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ERCC1P07992 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC1P07992 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ERCC1P07992 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC1P07992 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC1P07992 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC1P07992 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC1P07992 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
ERCC1P07992 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC1P07992 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ERCC1P07992 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC1P07992 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC1P07992 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC1P07992 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC1P07992 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC1P07992 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC1P07992 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC1P07992 YBX1P4-201ENST00000392794 808 ntBASIC20.61■□□□□ 0.89
ERCC1P07992 SPCS2P3-201ENST00000500401 656 ntBASIC20.61■□□□□ 0.89
ERCC1P07992 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC1P07992 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC1P07992 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC1P07992 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC1P07992 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ERCC1P07992 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC1P07992 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC1P07992 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC1P07992 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
ERCC1P07992 RARRES2P1-201ENST00000474487 481 ntBASIC20.6■□□□□ 0.89
ERCC1P07992 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC1P07992 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC1P07992 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ERCC1P07992 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC1P07992 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC1P07992 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.59■□□□□ 0.89
ERCC1P07992 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC1P07992 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC1P07992 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.59■□□□□ 0.89
ERCC1P07992 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ERCC1P07992 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
ERCC1P07992 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERCC1P07992 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.58■□□□□ 0.89
ERCC1P07992 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.58■□□□□ 0.89
ERCC1P07992 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ERCC1P07992 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ERCC1P07992 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC1P07992 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC1P07992 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC1P07992 AC010980.1-201ENST00000587192 1142 ntBASIC20.57■□□□□ 0.88
ERCC1P07992 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC1P07992 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC1P07992 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ERCC1P07992 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
ERCC1P07992 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ERCC1P07992 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
ERCC1P07992 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.56■□□□□ 0.88
ERCC1P07992 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC1P07992 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.55■□□□□ 0.88
ERCC1P07992 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC1P07992 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC1P07992 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC1P07992 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC1P07992 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC1P07992 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC1P07992 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC1P07992 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC1P07992 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC1P07992 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms