Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRAP04437 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRAP04437 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRAP04437 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
TCRAP04437 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRAP04437 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRAP04437 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRAP04437 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TCRAP04437 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRAP04437 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRAP04437 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TCRAP04437 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRAP04437 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRAP04437 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.8■□□□□ 0.44
TCRAP04437 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRAP04437 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TCRAP04437 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRAP04437 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRAP04437 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRAP04437 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRAP04437 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRAP04437 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.79■□□□□ 0.44
TCRAP04437 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRAP04437 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRAP04437 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRAP04437 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRAP04437 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRAP04437 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TCRAP04437 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRAP04437 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TCRAP04437 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRAP04437 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TCRAP04437 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TCRAP04437 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TCRAP04437 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.76■□□□□ 0.43
TCRAP04437 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.75■□□□□ 0.43
TCRAP04437 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TCRAP04437 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.75■□□□□ 0.43
TCRAP04437 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TCRAP04437 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TCRAP04437 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRAP04437 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRAP04437 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRAP04437 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.74■□□□□ 0.43
TCRAP04437 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.74■□□□□ 0.43
TCRAP04437 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRAP04437 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRAP04437 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRAP04437 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRAP04437 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.73■□□□□ 0.43
TCRAP04437 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.72■□□□□ 0.43
TCRAP04437 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TCRAP04437 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRAP04437 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TCRAP04437 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRAP04437 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.72■□□□□ 0.43
TCRAP04437 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.72■□□□□ 0.43
TCRAP04437 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TCRAP04437 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRAP04437 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRAP04437 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TCRAP04437 HLA-L-211ENST00000482052 1765 ntBASIC17.71■□□□□ 0.43
TCRAP04437 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.71■□□□□ 0.43
TCRAP04437 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.71■□□□□ 0.43
TCRAP04437 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRAP04437 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRAP04437 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRAP04437 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TCRAP04437 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms