Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TNRC18O15417 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
TNRC18O15417 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNRC18O15417 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNRC18O15417 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNRC18O15417 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
TNRC18O15417 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TNRC18O15417 AC099791.1-201ENST00000416440 715 ntBASIC26.35■■□□□ 1.81
TNRC18O15417 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TNRC18O15417 DUX4L19-201ENST00000557448 1267 ntBASIC26.35■■□□□ 1.81
TNRC18O15417 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.35■■□□□ 1.81
TNRC18O15417 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNRC18O15417 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
TNRC18O15417 AC008764.7-201ENST00000593779 1081 ntBASIC26.34■■□□□ 1.81
TNRC18O15417 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.34■■□□□ 1.81
TNRC18O15417 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNRC18O15417 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNRC18O15417 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNRC18O15417 KRT18P10-201ENST00000388836 1287 ntBASIC26.34■■□□□ 1.81
TNRC18O15417 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.34■■□□□ 1.81
TNRC18O15417 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
TNRC18O15417 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNRC18O15417 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNRC18O15417 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNRC18O15417 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNRC18O15417 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNRC18O15417 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
TNRC18O15417 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNRC18O15417 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.32■■□□□ 1.8
TNRC18O15417 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNRC18O15417 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNRC18O15417 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNRC18O15417 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.32■■□□□ 1.8
TNRC18O15417 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNRC18O15417 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.31■■□□□ 1.8
TNRC18O15417 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.31■■□□□ 1.8
TNRC18O15417 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.31■■□□□ 1.8
TNRC18O15417 SNX5-217ENST00000606557 1087 ntBASIC26.31■■□□□ 1.8
TNRC18O15417 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.31■■□□□ 1.8
TNRC18O15417 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNRC18O15417 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNRC18O15417 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNRC18O15417 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TNRC18O15417 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TNRC18O15417 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.31■■□□□ 1.8
TNRC18O15417 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNRC18O15417 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TNRC18O15417 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TNRC18O15417 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
TNRC18O15417 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNRC18O15417 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNRC18O15417 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TNRC18O15417 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.3■■□□□ 1.8
TNRC18O15417 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNRC18O15417 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNRC18O15417 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNRC18O15417 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNRC18O15417 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.29■■□□□ 1.8
TNRC18O15417 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TNRC18O15417 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TNRC18O15417 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.28■■□□□ 1.8
TNRC18O15417 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNRC18O15417 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.28■■□□□ 1.8
TNRC18O15417 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNRC18O15417 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNRC18O15417 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNRC18O15417 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
TNRC18O15417 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.27■■□□□ 1.8
TNRC18O15417 AC241377.3-202ENST00000626088 1088 ntBASIC26.27■■□□□ 1.8
TNRC18O15417 AC241585.3-202ENST00000628937 1088 ntBASIC26.27■■□□□ 1.8
TNRC18O15417 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.27■■□□□ 1.8
TNRC18O15417 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TNRC18O15417 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.26■■□□□ 1.8
TNRC18O15417 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNRC18O15417 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.26■■□□□ 1.79
TNRC18O15417 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNRC18O15417 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNRC18O15417 TSPY20P-201ENST00000450910 630 ntBASIC26.26■■□□□ 1.79
TNRC18O15417 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.26■■□□□ 1.79
TNRC18O15417 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.25■■□□□ 1.79
TNRC18O15417 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.25■■□□□ 1.79
TNRC18O15417 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.25■■□□□ 1.79
TNRC18O15417 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.25■■□□□ 1.79
TNRC18O15417 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNRC18O15417 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
TNRC18O15417 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNRC18O15417 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNRC18O15417 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TNRC18O15417 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TNRC18O15417 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.24■■□□□ 1.79
TNRC18O15417 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
TNRC18O15417 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNRC18O15417 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.23■■□□□ 1.79
TNRC18O15417 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.23■■□□□ 1.79
TNRC18O15417 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
TNRC18O15417 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.22■■□□□ 1.79
TNRC18O15417 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.22■■□□□ 1.79
TNRC18O15417 SYT6-210ENST00000641643 1587 ntBASIC26.22■■□□□ 1.79
TNRC18O15417 AP004833.2-201ENST00000532228 1454 ntBASIC26.22■■□□□ 1.79
TNRC18O15417 AC027612.3-201ENST00000413684 1047 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms