Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRGV1A0A0A0MS02 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 MIR6765-201ENST00000614092 87 ntBASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV1A0A0A0MS02 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 DUX4L9-201ENST00000449051 1259 ntBASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV1A0A0A0MS02 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 AP003733.4-201ENST00000623785 1697 ntBASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 SPCS2P3-201ENST00000500401 656 ntBASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV1A0A0A0MS02 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 RPS2P7-201ENST00000447334 885 ntBASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 FOXO3B-201ENST00000395675 1928 ntBASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV1A0A0A0MS02 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV1A0A0A0MS02 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRGV1A0A0A0MS02 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.89■□□□□ 0.3
TRGV1A0A0A0MS02 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 KRT18P60-201ENST00000312876 1297 ntBASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 NTF6A-201ENST00000591175 560 ntBASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 AC129492.7-201ENST00000622992 756 ntBASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV1A0A0A0MS02 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV1A0A0A0MS02 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRGV1A0A0A0MS02 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms