Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RP1L1Q8IWN7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.63■■□□□ 1.85
RP1L1Q8IWN7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.63■■□□□ 1.85
RP1L1Q8IWN7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RP1L1Q8IWN7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.61■■□□□ 1.85
RP1L1Q8IWN7 RPS2P35-201ENST00000443417 897 ntBASIC26.6■■□□□ 1.85
RP1L1Q8IWN7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RP1L1Q8IWN7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RP1L1Q8IWN7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.58■■□□□ 1.85
RP1L1Q8IWN7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
RP1L1Q8IWN7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RP1L1Q8IWN7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.55■■□□□ 1.84
RP1L1Q8IWN7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.54■■□□□ 1.84
RP1L1Q8IWN7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.54■■□□□ 1.84
RP1L1Q8IWN7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.54■■□□□ 1.84
RP1L1Q8IWN7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.51■■□□□ 1.83
RP1L1Q8IWN7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RP1L1Q8IWN7 AL031258.1-201ENST00000623562 325 ntBASIC26.45■■□□□ 1.83
RP1L1Q8IWN7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
RP1L1Q8IWN7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RP1L1Q8IWN7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RP1L1Q8IWN7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.4■■□□□ 1.82
RP1L1Q8IWN7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.4■■□□□ 1.82
RP1L1Q8IWN7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RP1L1Q8IWN7 AC097358.2-201ENST00000607541 1159 ntBASIC26.4■■□□□ 1.82
RP1L1Q8IWN7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
RP1L1Q8IWN7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RP1L1Q8IWN7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RP1L1Q8IWN7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RP1L1Q8IWN7 AC136428.2-201ENST00000563187 214 ntBASIC26.33■■□□□ 1.81
RP1L1Q8IWN7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RP1L1Q8IWN7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.31■■□□□ 1.8
RP1L1Q8IWN7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.29■■□□□ 1.8
RP1L1Q8IWN7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.29■■□□□ 1.8
RP1L1Q8IWN7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.26■■□□□ 1.79
RP1L1Q8IWN7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.25■■□□□ 1.79
RP1L1Q8IWN7 SUZ12P1-203ENST00000578195 985 ntBASIC26.25■■□□□ 1.79
RP1L1Q8IWN7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RP1L1Q8IWN7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.24■■□□□ 1.79
RP1L1Q8IWN7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RP1L1Q8IWN7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.23■■□□□ 1.79
RP1L1Q8IWN7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RP1L1Q8IWN7 SETD8P1-201ENST00000623146 1180 ntBASIC26.21■■□□□ 1.79
RP1L1Q8IWN7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.17■■□□□ 1.78
RP1L1Q8IWN7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.17■■□□□ 1.78
RP1L1Q8IWN7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RP1L1Q8IWN7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.13■■□□□ 1.77
RP1L1Q8IWN7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RP1L1Q8IWN7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RP1L1Q8IWN7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.12■■□□□ 1.77
RP1L1Q8IWN7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RP1L1Q8IWN7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RP1L1Q8IWN7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.08■■□□□ 1.77
RP1L1Q8IWN7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
RP1L1Q8IWN7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RP1L1Q8IWN7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RP1L1Q8IWN7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
RP1L1Q8IWN7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RP1L1Q8IWN7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RP1L1Q8IWN7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RP1L1Q8IWN7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.88■■□□□ 1.73
RP1L1Q8IWN7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RP1L1Q8IWN7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
RP1L1Q8IWN7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RP1L1Q8IWN7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RP1L1Q8IWN7 AP006261.1-201ENST00000584783 668 ntBASIC25.85■■□□□ 1.73
RP1L1Q8IWN7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.84■■□□□ 1.73
RP1L1Q8IWN7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RP1L1Q8IWN7 AL162393.1-201ENST00000437852 946 ntBASIC25.83■■□□□ 1.73
RP1L1Q8IWN7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RP1L1Q8IWN7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RP1L1Q8IWN7 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.8■■□□□ 1.72
RP1L1Q8IWN7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.79■■□□□ 1.72
RP1L1Q8IWN7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RP1L1Q8IWN7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.78■■□□□ 1.72
RP1L1Q8IWN7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RP1L1Q8IWN7 AL391121.1-201ENST00000607967 1349 ntBASIC25.74■■□□□ 1.71
RP1L1Q8IWN7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RP1L1Q8IWN7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RP1L1Q8IWN7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.71■■□□□ 1.71
RP1L1Q8IWN7 HLA-V-202ENST00000446817 847 ntBASIC25.7■■□□□ 1.7
RP1L1Q8IWN7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
RP1L1Q8IWN7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RP1L1Q8IWN7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RP1L1Q8IWN7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.68■■□□□ 1.7
RP1L1Q8IWN7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RP1L1Q8IWN7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
RP1L1Q8IWN7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RP1L1Q8IWN7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.66■■□□□ 1.7
RP1L1Q8IWN7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RP1L1Q8IWN7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.65■■□□□ 1.7
RP1L1Q8IWN7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.64■■□□□ 1.7
RP1L1Q8IWN7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.64■■□□□ 1.7
RP1L1Q8IWN7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RP1L1Q8IWN7 ABHD17AP4-201ENST00000411545 909 ntBASIC25.64■■□□□ 1.69
RP1L1Q8IWN7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RP1L1Q8IWN7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RP1L1Q8IWN7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RP1L1Q8IWN7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RP1L1Q8IWN7 CAHM-201ENST00000604200 896 ntBASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms