Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SCN10AQ9Y5Y9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.36■■□□□ 1.81
SCN10AQ9Y5Y9 MIR935-201ENST00000401179 91 ntBASIC26.36■■□□□ 1.81
SCN10AQ9Y5Y9 AL136116.3-201ENST00000402907 1138 ntBASIC26.36■■□□□ 1.81
SCN10AQ9Y5Y9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.35■■□□□ 1.81
SCN10AQ9Y5Y9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SCN10AQ9Y5Y9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCN10AQ9Y5Y9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SCN10AQ9Y5Y9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.34■■□□□ 1.81
SCN10AQ9Y5Y9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SCN10AQ9Y5Y9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.33■■□□□ 1.81
SCN10AQ9Y5Y9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
SCN10AQ9Y5Y9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SCN10AQ9Y5Y9 AL139246.5-201ENST00000606645 996 ntBASIC26.33■■□□□ 1.81
SCN10AQ9Y5Y9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.33■■□□□ 1.81
SCN10AQ9Y5Y9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.33■■□□□ 1.8
SCN10AQ9Y5Y9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
SCN10AQ9Y5Y9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCN10AQ9Y5Y9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCN10AQ9Y5Y9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCN10AQ9Y5Y9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.3■■□□□ 1.8
SCN10AQ9Y5Y9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCN10AQ9Y5Y9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SCN10AQ9Y5Y9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.29■■□□□ 1.8
SCN10AQ9Y5Y9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCN10AQ9Y5Y9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCN10AQ9Y5Y9 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.29■■□□□ 1.8
SCN10AQ9Y5Y9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SCN10AQ9Y5Y9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCN10AQ9Y5Y9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCN10AQ9Y5Y9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCN10AQ9Y5Y9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCN10AQ9Y5Y9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCN10AQ9Y5Y9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 AL356740.2-201ENST00000601559 647 ntBASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 SNX5-217ENST00000606557 1087 ntBASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.26■■□□□ 1.79
SCN10AQ9Y5Y9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.25■■□□□ 1.79
SCN10AQ9Y5Y9 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.25■■□□□ 1.79
SCN10AQ9Y5Y9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCN10AQ9Y5Y9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.24■■□□□ 1.79
SCN10AQ9Y5Y9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCN10AQ9Y5Y9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCN10AQ9Y5Y9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SCN10AQ9Y5Y9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.23■■□□□ 1.79
SCN10AQ9Y5Y9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCN10AQ9Y5Y9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCN10AQ9Y5Y9 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 FOXO3B-201ENST00000395675 1928 ntBASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCN10AQ9Y5Y9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCN10AQ9Y5Y9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.21■■□□□ 1.79
SCN10AQ9Y5Y9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCN10AQ9Y5Y9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCN10AQ9Y5Y9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.21■■□□□ 1.79
SCN10AQ9Y5Y9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCN10AQ9Y5Y9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.2■■□□□ 1.79
SCN10AQ9Y5Y9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SCN10AQ9Y5Y9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCN10AQ9Y5Y9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCN10AQ9Y5Y9 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.19■■□□□ 1.78
SCN10AQ9Y5Y9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCN10AQ9Y5Y9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCN10AQ9Y5Y9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.18■■□□□ 1.78
SCN10AQ9Y5Y9 AC096631.2-201ENST00000436136 790 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms