Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MIR638-201ENST00000385237 100 ntBASIC31.19■■■□□ 2.58
SPG7Q9UQ90 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.19■■■□□ 2.58
SPG7Q9UQ90 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC31.19■■■□□ 2.58
SPG7Q9UQ90 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SPG7Q9UQ90 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPG7Q9UQ90 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPG7Q9UQ90 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
SPG7Q9UQ90 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SPG7Q9UQ90 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SPG7Q9UQ90 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SPG7Q9UQ90 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.17■■■□□ 2.58
SPG7Q9UQ90 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.17■■■□□ 2.58
SPG7Q9UQ90 AL139246.5-201ENST00000606645 996 ntBASIC31.17■■■□□ 2.58
SPG7Q9UQ90 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPG7Q9UQ90 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPG7Q9UQ90 AL136116.3-201ENST00000402907 1138 ntBASIC31.16■■■□□ 2.58
SPG7Q9UQ90 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.16■■■□□ 2.58
SPG7Q9UQ90 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.16■■■□□ 2.58
SPG7Q9UQ90 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPG7Q9UQ90 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.16■■■□□ 2.58
SPG7Q9UQ90 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
SPG7Q9UQ90 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.15■■■□□ 2.58
SPG7Q9UQ90 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SPG7Q9UQ90 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SPG7Q9UQ90 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.15■■■□□ 2.58
SPG7Q9UQ90 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.15■■■□□ 2.58
SPG7Q9UQ90 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SPG7Q9UQ90 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SPG7Q9UQ90 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
SPG7Q9UQ90 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.14■■■□□ 2.58
SPG7Q9UQ90 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.14■■■□□ 2.58
SPG7Q9UQ90 AL356740.2-201ENST00000601559 647 ntBASIC31.14■■■□□ 2.58
SPG7Q9UQ90 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SPG7Q9UQ90 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SPG7Q9UQ90 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
SPG7Q9UQ90 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SPG7Q9UQ90 AF131216.4-201ENST00000638924 1588 ntBASIC31.13■■■□□ 2.57
SPG7Q9UQ90 MIR935-201ENST00000401179 91 ntBASIC31.13■■■□□ 2.57
SPG7Q9UQ90 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SPG7Q9UQ90 FOXO3B-201ENST00000395675 1928 ntBASIC31.13■■■□□ 2.57
SPG7Q9UQ90 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SPG7Q9UQ90 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SPG7Q9UQ90 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SPG7Q9UQ90 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.13■■■□□ 2.57
SPG7Q9UQ90 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
SPG7Q9UQ90 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.11■■■□□ 2.57
SPG7Q9UQ90 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SPG7Q9UQ90 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SPG7Q9UQ90 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.1■■■□□ 2.57
SPG7Q9UQ90 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.1■■■□□ 2.57
SPG7Q9UQ90 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SPG7Q9UQ90 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.09■■■□□ 2.57
SPG7Q9UQ90 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.09■■■□□ 2.57
SPG7Q9UQ90 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SPG7Q9UQ90 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SPG7Q9UQ90 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SPG7Q9UQ90 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPG7Q9UQ90 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPG7Q9UQ90 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPG7Q9UQ90 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPG7Q9UQ90 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
SPG7Q9UQ90 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPG7Q9UQ90 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SPG7Q9UQ90 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPG7Q9UQ90 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
SPG7Q9UQ90 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPG7Q9UQ90 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPG7Q9UQ90 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
SPG7Q9UQ90 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.06■■■□□ 2.56
SPG7Q9UQ90 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPG7Q9UQ90 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPG7Q9UQ90 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.05■■■□□ 2.56
SPG7Q9UQ90 MIR4466-201ENST00000606121 54 ntBASIC31.05■■■□□ 2.56
SPG7Q9UQ90 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SPG7Q9UQ90 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SPG7Q9UQ90 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SPG7Q9UQ90 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SPG7Q9UQ90 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SPG7Q9UQ90 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.03■■■□□ 2.56
SPG7Q9UQ90 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SPG7Q9UQ90 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SPG7Q9UQ90 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.01■■■□□ 2.56
SPG7Q9UQ90 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.01■■■□□ 2.56
SPG7Q9UQ90 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.01■■■□□ 2.55
SPG7Q9UQ90 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.01■■■□□ 2.55
SPG7Q9UQ90 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SPG7Q9UQ90 AC110285.6-201ENST00000617652 491 ntBASIC31.01■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms