Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 DUX4L18-201ENST00000553347 1267 ntBASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDHGC3Q9UN70 LONRF2P2-201ENST00000439212 571 ntBASIC25.02■■□□□ 1.6
PCDHGC3Q9UN70 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGC3Q9UN70 MIR6089-201ENST00000616698 64 ntBASIC25.02■■□□□ 1.6
PCDHGC3Q9UN70 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
PCDHGC3Q9UN70 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGC3Q9UN70 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 AP003733.4-201ENST00000623785 1697 ntBASIC25.01■■□□□ 1.59
PCDHGC3Q9UN70 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25■■□□□ 1.59
PCDHGC3Q9UN70 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC3Q9UN70 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC3Q9UN70 TSPY13P-201ENST00000338964 914 ntBASIC24.99■■□□□ 1.59
PCDHGC3Q9UN70 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PCDHGC3Q9UN70 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC3Q9UN70 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGC3Q9UN70 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 AC012354.3-201ENST00000623734 483 ntBASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGC3Q9UN70 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
PCDHGC3Q9UN70 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHGC3Q9UN70 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGC3Q9UN70 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 AC019171.1-201ENST00000601251 1056 ntBASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGC3Q9UN70 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGC3Q9UN70 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGC3Q9UN70 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
PCDHGC3Q9UN70 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGC3Q9UN70 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 AL592295.1-201ENST00000400984 884 ntBASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 AC139795.1-202ENST00000500444 432 ntBASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGC3Q9UN70 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.93■■□□□ 1.58
PCDHGC3Q9UN70 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHGC3Q9UN70 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
PCDHGC3Q9UN70 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGC3Q9UN70 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGC3Q9UN70 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGC3Q9UN70 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGC3Q9UN70 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 AC074183.2-201ENST00000623112 922 ntBASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHGC3Q9UN70 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGC3Q9UN70 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGC3Q9UN70 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHGC3Q9UN70 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGC3Q9UN70 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGC3Q9UN70 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms